DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nca and guca1a

DIOPT Version :9

Sequence 1:NP_788543.1 Gene:Nca / 40186 FlyBaseID:FBgn0013303 Length:190 Species:Drosophila melanogaster
Sequence 2:NP_001096291.1 Gene:guca1a / 100124863 XenbaseID:XB-GENE-22061924 Length:203 Species:Xenopus tropicalis


Alignment Length:190 Identity:81/190 - (42%)
Similarity:115/190 - (60%) Gaps:22/190 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 DLKQNTEFTDAEIQEWYKGFLKDCPSGHLSVEEFKKIYG--NFFPYGDASKFAEHVFRTFDANGD 77
            |.|...|.:..||.:|||.|:.:||||.|:..|||:.:.  |..|  .::::.|.:|.|||.|.|
 Frog     5 DGKAVEELSATEIHQWYKKFMTECPSGQLTQHEFKQFFNLKNLSP--ASNQYIEQMFNTFDFNKD 67

  Fly    78 GTIDFREFLCALSVTSRGKLEQKLKWAFSMYDLDGNGYISRQEMLEIVTAIYKMVGSVMKMPEDE 142
            |.:||.|::.|||:..:||:||||||.|.:||:||||.|.|.|:|.|:    |.:.::.:..|| 
 Frog    68 GYMDFMEYVAALSLVLKGKVEQKLKWYFKLYDVDGNGCIDRGELLNII----KAIRAINRCNED- 127

  Fly   143 STPEKRTDKIFRQMDRNKDGKLSLEEFIEGAKSD-------------PSIVRLLQCDPQS 189
            .|.|:.||.:|.::|.|.||:|||||||||.:.|             ..||.::|.|.||
 Frog   128 MTAEEFTDMVFDKIDINGDGELSLEEFIEGVQRDEFLLNVLTRSLDLKHIVHMIQNDGQS 187

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NcaNP_788543.1 FRQ1 13..179 CDD:227455 75/178 (42%)
guca1aNP_001096291.1 FRQ1 11..162 CDD:227455 72/157 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000038
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23055
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X31
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.010

Return to query results.
Submit another query.