DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nca and kcnip2

DIOPT Version :10

Sequence 1:NP_788543.1 Gene:Nca / 40186 FlyBaseID:FBgn0013303 Length:190 Species:Drosophila melanogaster
Sequence 2:XP_003201187.2 Gene:kcnip2 / 100003947 ZFINID:ZDB-GENE-081031-91 Length:253 Species:Danio rerio


Alignment Length:176 Identity:68/176 - (38%)
Similarity:116/176 - (65%) Gaps:0/176 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 KPEVLEDLKQNTEFTDAEIQEWYKGFLKDCPSGHLSVEEFKKIYGNFFPYGDASKFAEHVFRTFD 73
            :|:.|:.|.:.|:||..|:|..|:.|..|||:|.::.|.|:.||.:|||:||:|.:|..:|..||
Zfish    72 RPDSLDKLMELTKFTKTELQILYRSFKNDCPTGVVNEETFQLIYSHFFPHGDSSAYAHFLFEAFD 136

  Fly    74 ANGDGTIDFREFLCALSVTSRGKLEQKLKWAFSMYDLDGNGYISRQEMLEIVTAIYKMVGSVMKM 138
            ...:|.::|.:|:..||:..||.:..:|.||||:|||:.:|.|:::||.:|:.:||.|:|.....
Zfish   137 RRKNGAVNFEDFVVGLSIILRGTVTDRLSWAFSLYDLNKDGCITKEEMNDIMKSIYDMMGKNTCP 201

  Fly   139 PEDESTPEKRTDKIFRQMDRNKDGKLSLEEFIEGAKSDPSIVRLLQ 184
            ..::|.|.:..:..|::||||.||.:::|||:|..:.|.:|:..:|
Zfish   202 CINDSAPREHVESFFQKMDRNNDGVITMEEFLESCQKDEAIMESMQ 247

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NcaNP_788543.1 FRQ1 21..175 CDD:444056 61/153 (40%)
kcnip2XP_003201187.2 None

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