DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ac76E and phlp-2

DIOPT Version :9

Sequence 1:NP_001246838.1 Gene:Ac76E / 40180 FlyBaseID:FBgn0004852 Length:1312 Species:Drosophila melanogaster
Sequence 2:NP_001337270.1 Gene:phlp-2 / 185690 WormBaseID:WBGene00009647 Length:1126 Species:Caenorhabditis elegans


Alignment Length:410 Identity:68/410 - (16%)
Similarity:131/410 - (31%) Gaps:168/410 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   265 QLLLSVIPAYIAAEVKRSIMLK----MADACQRAGGQASTSATRFHELHVQRHTNVTILFADIVN 325
            :.:.|.:...::.:: |||:|:    :.:..:|.|  ||....|.||..:           :|.:
 Worm   802 RFMTSYLKENVSMDI-RSILLRCHCELGEEGERLG--ASVMIIRVHEKRL-----------EIAS 852

  Fly   326 FTPLSSSLTASDLVKTL--------NDLFGRFDQ----IAQENQCLRIK-ILGDCYYC--VSGLP 375
            ...:|:::..:..:|.:        :|.:.|..:    :.:||   ||. ::|.....  .|..|
 Worm   853 TGTMSAAIARNQKLKMIINGRYEIDDDEYSRIREAHGFVDEEN---RINGVIGSSRQIGHFSTFP 914

  Fly   376 ISRPQHATNCVNMGLQMIDAIRHVREATGINVDMRIGIHTGNVLCGVLGLRKWQFDVWS----DD 436
            :..|.|:...:.:..|:                  .|:..||.:            :|:    ||
 Worm   915 VVLPTHSYRNIQLNEQI------------------EGLIVGNNM------------IWNMLSIDD 949

  Fly   437 V--TLANHMESGGVAGRVHITKQTLDFLGDKFEVEQGEGGNRDAY-------------------- 479
            :  |..|:.....||.::....|:.|:           |||.:..                    
 Worm   950 LNSTFHNNRSPIVVAKKIQDQLQSYDY-----------GGNSNILVLRRIKPQMTFNGFSTSSTK 1003

  Fly   480 ------LADHKVESYLI--VP--------PKPAYTYSVPRVVECIEQNDPSPTTEETKEIKETDQ 528
                  :|..|::..|:  ||        |.|    .||..:..|....|||             
 Worm  1004 NQVTPDIAIPKIDEQLVLAVPALILPEYHPSP----PVPPPIPAIRHRTPSP------------- 1051

  Fly   529 SHEATDVADVLLPVTVAPPPAIVDEKMSPTSINSQEAPLH--APLASAASMSI------------ 579
                             |||.:......|.|...:|..:.  :.|:...::||            
 Worm  1052 -----------------PPPPLPSSTPPPVSSEHEEINVRQSSTLSGGYTLSIDRFYSSSSTVSS 1099

  Fly   580 -KELSEEEDEADEATAVTEP 598
             |:.:|..|...::..::.|
 Worm  1100 RKQFNETRDLLSKSLKLSPP 1119

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ac76ENP_001246838.1 AC_N <67..289 CDD:292831 5/27 (19%)
CYCc 259..467 CDD:214485 39/226 (17%)
Guanylate_cyc 311..469 CDD:278633 27/178 (15%)
BASP1 510..667 CDD:283191 16/104 (15%)
CYCc 1079..1283 CDD:214485
Guanylate_cyc 1101..1305 CDD:278633
phlp-2NP_001337270.1 leucine-rich repeat 232..253 CDD:275380
leucine-rich repeat 254..288 CDD:275380
PLN00113 283..>718 CDD:331614
leucine-rich repeat 289..311 CDD:275380
leucine-rich repeat 312..334 CDD:275380
leucine-rich repeat 335..357 CDD:275380
leucine-rich repeat 358..379 CDD:275380
leucine-rich repeat 380..440 CDD:275380
leucine-rich repeat 441..485 CDD:275380
leucine-rich repeat 486..508 CDD:275380
leucine-rich repeat 509..534 CDD:275380
leucine-rich repeat 554..577 CDD:275380
leucine-rich repeat 578..602 CDD:275380
leucine-rich repeat 603..625 CDD:275380
leucine-rich repeat 626..649 CDD:275380
leucine-rich repeat 650..672 CDD:275380
leucine-rich repeat 673..694 CDD:275380
PP2Cc 754..985 CDD:214625 42/240 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2114
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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