DRSC/TRiP Functional Genomics Resources

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Protein Alignment Grasp65 and GRH1

DIOPT Version :9

Sequence 1:NP_649160.1 Gene:Grasp65 / 40177 FlyBaseID:FBgn0036919 Length:460 Species:Drosophila melanogaster
Sequence 2:NP_010805.1 Gene:GRH1 / 852129 SGDID:S000002925 Length:372 Species:Saccharomyces cerevisiae


Alignment Length:335 Identity:80/335 - (23%)
Similarity:129/335 - (38%) Gaps:104/335 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 LEAFFDFIVAIAGTRLD----------QDNDMLKELLRQNVDKPVRLTVYSSKTQTVRELTLT-- 85
            |::|||:||......:.          .|...:..:..::..:.:::.::|:|..|.|:..::  
Yeast    80 LQSFFDYIVGFNDDPVPVVSNQHGFSYPDYRRITSIFNEHCGRTLKVNIWSAKGGTFRDEYISII 144

  Fly    86 ------------------PSNNWGGQ-GLLGVSIRFCSFEGANESVWHILEVH-PNSPAELAGLR 130
                              ||:....| ..||..:::.... |:...:|||.|: |:.||:.|||.
Yeast   145 SKESDDLDDVSLNHDERRPSSGEAHQFQALGFKVQWTPLI-ASTFTYHILNVNIPDGPAQSAGLI 208

  Fly   131 AYSDYVIGA-DAIRHENDD--LFTLIETHEQQPLKMYVYNLDDDACREVTIKPNTAWGGEGALGC 192
            ...||:||. |.:.....:  |..::.:.....|.:||||...|..|.:|:.    .|.:|.|||
Yeast   209 PDEDYIIGCQDGLLATGGETLLQDIVRSRANYDLVLYVYNKVSDCVRPITVH----IGPDGRLGC 269

  Fly   193 GIGFGYLHRIPV------QAE-------------PVTSSSAAVPAAAAAESTAPLLTAGGAAPAG 238
            .:|:|:|||||.      ||:             ||.|.:|.||:|..|                
Yeast   270 NVGYGFLHRIPTVKHCPQQAQQQGQDDNPVPVPVPVESETAFVPSAFTA---------------- 318

  Fly   239 AQVAQVVSPTLPYIPPLANTFGSTNAEVRPPTIEPPAQSLFKTYFNPDEATD-ALTAALESQATI 302
                          ||:.....|.|.:...|.       ....|||  |..| :.|||..:::.|
Yeast   319 --------------PPVPTKKKSKNKKGTQPL-------AMDDYFN--EGRDKSSTAAKSAESDI 360

  Fly   303 AEPVSVPAPP 312
            ..|     ||
Yeast   361 LAP-----PP 365

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Grasp65NP_649160.1 PDZ <14..100 CDD:294084 16/97 (16%)
GRASP55_65 69..205 CDD:282364 46/166 (28%)
GRH1NP_010805.1 GRH1 1..372 CDD:227558 80/335 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157346075
Domainoid 1 1.000 62 1.000 Domainoid score I2499
eggNOG 1 0.900 - - E1_COG5233
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002082
OrthoInspector 1 1.000 - - oto98976
orthoMCL 1 0.900 - - OOG6_102404
Panther 1 1.100 - - LDO PTHR12893
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1703
SonicParanoid 1 1.000 - - X1377
TreeFam 00.000 Not matched by this tool.
1110.770

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