DRSC/TRiP Functional Genomics Resources

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Protein Alignment Grasp65 and Gorasp1

DIOPT Version :9

Sequence 1:NP_649160.1 Gene:Grasp65 / 40177 FlyBaseID:FBgn0036919 Length:460 Species:Drosophila melanogaster
Sequence 2:NP_083252.1 Gene:Gorasp1 / 74498 MGIID:1921748 Length:446 Species:Mus musculus


Alignment Length:466 Identity:171/466 - (36%)
Similarity:242/466 - (51%) Gaps:80/466 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGSSHSIHVPGGGTEGYHVLKVQDNSPGQKAGLEAFFDFIVAIAGTRLDQDNDMLKELLRQNVDK 65
            ||...|...|.|| ||:|:..||:|||.|:||||.:||||:.|..:||:::||.||.||:.||:|
Mouse     1 MGLGASSEQPAGG-EGFHLHGVQENSPAQQAGLEPYFDFIITIGHSRLNKENDTLKALLKANVEK 64

  Fly    66 PVRLTVYSSKTQTVRELTLTPSNNWGGQGLLGVSIRFCSFEGANESVWHILEVHPNSPAELAGLR 130
            ||:|.|::.||..|||:.:.|||.||||||||.|:|||||..|:|.|||:|:|.|:|||.||||.
Mouse    65 PVKLEVFNMKTMKVREVEVVPSNMWGGQGLLGASVRFCSFRRASEHVWHVLDVEPSSPAALAGLC 129

  Fly   131 AYSDYVIGADAIRHENDDLFTLIETHEQQPLKMYVYNLDDDACREVTIKPNTAWGGEGALGCGIG 195
            .|:||::|:|.|..|::|.|||||:||.:|||:.|||.:.|:|||||:.||.||||||:||||||
Mouse   130 PYTDYIVGSDQILQESEDFFTLIESHEGKPLKLMVYNSESDSCREVTVTPNAAWGGEGSLGCGIG 194

  Fly   196 FGYLHRIPVQ-----AEPVTSSSAAVPAAAAAESTAPLLTAGGAAP--------AGAQVAQVVSP 247
            :|||||||.|     .:|..::....||..:..:..||    ||.|        :|.::....|.
Mouse   195 YGYLHRIPTQPSSQHKKPPGATPPGTPATTSQLTAFPL----GAPPPWPIPQDSSGPELGSRQSD 255

  Fly   248 TLPYIPPLANTFGSTNAEVRPPTIEPPAQSLFKTYFNPDEATDALTAALESQATIAEPVSVPAPP 312
            .:..:|.:..:|                                    :|.|      :..|..|
Mouse   256 FMEALPQVPGSF------------------------------------MEGQ------LLGPGSP 278

  Fly   313 A--VADVSVAQPQVQVPAPAQPLPPPANIFIPGVFDPSTQQ--NANALGGIPAAQLPFPQATAAP 373
            :  .||.......:::  |.||.||...:..||..|.|...  :::.:...|:    ...:|...
Mouse   279 SHGAADCGGCLRAMEI--PLQPPPPVQRVMDPGFLDVSGMSLLDSSNISVCPS----LSSSTVLT 337

  Fly   374 AAVPMFSAPQQAYMSAPAALSYPAGAQTVPSYPQVQPSMGGLFPTQPTPLPPQMAHVFAPPVPPQ 438
            :.....|.|:....|:.   |:..|.:...|..:.:.|    ||..| ....|..|:  |.:...
Mouse   338 STAVSVSGPEDIGSSSS---SHERGGEATWSGSEFEIS----FPDSP-GAQAQADHL--PRLTLP 392

  Fly   439 AGAAPAAGNDE 449
            .|...||..:|
Mouse   393 DGLTSAASPEE 403

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Grasp65NP_649160.1 PDZ <14..100 CDD:294084 49/85 (58%)
GRASP55_65 69..205 CDD:282364 87/135 (64%)
Gorasp1NP_083252.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..20 9/19 (47%)
GRASP. /evidence=ECO:0000255|PROSITE-ProRule:PRU01214 14..214 120/199 (60%)
PDZ <14..99 CDD:294084 49/84 (58%)
GRASP55_65 68..204 CDD:282364 87/135 (64%)
Essential for interaction with GOLGA2/GM130. /evidence=ECO:0000250 189..201 10/11 (91%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 202..252 11/53 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 343..446 17/71 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167849168
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5233
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1366434at2759
OrthoFinder 1 1.000 - - FOG0002082
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_102404
Panther 1 1.100 - - LDO PTHR12893
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1703
SonicParanoid 1 1.000 - - X1377
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
109.740

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