DRSC/TRiP Functional Genomics Resources

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Protein Alignment Grasp65 and gorasp1a

DIOPT Version :9

Sequence 1:NP_649160.1 Gene:Grasp65 / 40177 FlyBaseID:FBgn0036919 Length:460 Species:Drosophila melanogaster
Sequence 2:XP_005171287.1 Gene:gorasp1a / 492770 ZFINID:ZDB-GENE-030826-23 Length:461 Species:Danio rerio


Alignment Length:449 Identity:172/449 - (38%)
Similarity:246/449 - (54%) Gaps:83/449 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 PGGGTEGYHVLKVQDNSPGQKAGLEAFFDFIVAIAGTRLDQDNDMLKELLRQNVDKPVRLTVYSS 74
            |.||||||||..||::||.::||||.|||||::|...||:|:|||||:||:.||:|||::.|||:
Zfish    11 PEGGTEGYHVHGVQEDSPAERAGLEPFFDFIISIGHNRLNQENDMLKDLLKANVEKPVKMEVYST 75

  Fly    75 KTQTVRELTLTPSNNWGGQGLLGVSIRFCSFEGANESVWHILEVHPNSPAELAGLRAYSDYVIGA 139
            ||..:|||.:.|||.||||||||.|:|||||:||||:|||:|:|..||||.||||:.:||:::||
Zfish    76 KTMRMRELEVVPSNMWGGQGLLGASVRFCSFQGANENVWHVLDVESNSPAALAGLQEHSDFIVGA 140

  Fly   140 DAIRHENDDLFTLIETHEQQPLKMYVYNLDDDACREVTIKPNTAWGGEGALGCGIGFGYLHRIPV 204
            |.:..:::|.|:|||.||.:|||:.:||.:.|.||||.:.||.||||||:||||||:|||||||.
Zfish   141 DQVLQDSEDFFSLIEAHEGKPLKLLIYNTETDKCREVIVTPNGAWGGEGSLGCGIGYGYLHRIPA 205

  Fly   205 QAEPVTS---SSAAVPAAAAAESTAPL-------LTAGGAAPAGAQVAQVVSPTLPYIPPLANTF 259
            |.|...|   ||...|.|...|...|.       |.|.|.:.:|                     
Zfish   206 QPEGPKSEKVSSRESPVAGNPEQEYPTNGFSEVSLMASGQSLSG--------------------- 249

  Fly   260 GSTNAEVRPPTIEPPAQSLFKTYFNPDEATDALTAALESQAT-IAEPVSVPAPPAVADVSVAQPQ 323
                .::..| :.||.|.:    .:|..:..:..|.:.|:.: ||:.:.:    :.:.:.:....
Zfish   250 ----MDLETP-LPPPIQRV----MDPGFSDHSEVALMNSEVSDIADRLDL----STSSIDMTNTS 301

  Fly   324 VQVPAPAQPLPPPANIFIPGVFDPSTQQNANALGGIPAAQLPFPQATAAPAAVPMFSA---PQQA 385
            :.|...|.         :.||   ...|:::...|.|..|:     |...:||...|:   |..|
Zfish   302 LAVKEDAD---------VSGV---EELQDSDFHSGDPEEQI-----TEEYSAVDFSSSITPPSNA 349

  Fly   386 YMSAPAALSYPAGAQTVPSYPQVQPSMGGLFPTQPTPLPPQMAHVFAPPVPPQAGAAPA 444
              |.|.:||:    ..:|:            ||....:|..:|.:....:||...:.||
Zfish   350 --SPPLSLSH----SLLPN------------PTLENSVPTDVASLMNSSIPPLDSSIPA 390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Grasp65NP_649160.1 PDZ <14..100 CDD:294084 54/85 (64%)
GRASP55_65 69..205 CDD:282364 85/135 (63%)
gorasp1aXP_005171287.1 PDZ <15..101 CDD:294084 54/85 (64%)
GRASP55_65 70..206 CDD:282364 85/135 (63%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170594728
Domainoid 1 1.000 222 1.000 Domainoid score I2524
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1366434at2759
OrthoFinder 1 1.000 - - FOG0002082
OrthoInspector 1 1.000 - - otm25559
orthoMCL 1 0.900 - - OOG6_102404
Panther 1 1.100 - - LDO PTHR12893
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1703
SonicParanoid 1 1.000 - - X1377
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1110.880

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