DRSC/TRiP Functional Genomics Resources

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Protein Alignment Grasp65 and gorasp1

DIOPT Version :9

Sequence 1:NP_649160.1 Gene:Grasp65 / 40177 FlyBaseID:FBgn0036919 Length:460 Species:Drosophila melanogaster
Sequence 2:NP_001004805.1 Gene:gorasp1 / 448042 XenbaseID:XB-GENE-976361 Length:417 Species:Xenopus tropicalis


Alignment Length:482 Identity:184/482 - (38%)
Similarity:252/482 - (52%) Gaps:111/482 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGSSHSIHVP--GGGTEGYHVLKVQDNSPGQKAGLEAFFDFIVAIAGTRLDQDNDMLKELLRQNV 63
            ||.|.|:...  .||||||||..:|:|||.|.||||.|||||:||...||:::|.|.|:||:.|.
 Frog     1 MGLSMSLSSEPLEGGTEGYHVHGIQENSPAQSAGLEPFFDFIIAIGHARLNKENSMFKDLLKANA 65

  Fly    64 DKPVRLTVYSSKTQTVRELTLTPSNNWGGQGLLGVSIRFCSFEGANESVWHILEVHPNSPAELAG 128
            :|||:|.||::|:..|||:.:||||.||||||||.|:|||||:||||.|||:|:|.|||||.|||
 Frog    66 EKPVKLEVYNTKSMKVREVEVTPSNMWGGQGLLGASVRFCSFQGANEHVWHVLDVEPNSPAALAG 130

  Fly   129 LRAYSDYVIGADAIRHENDDLFTLIETHEQQPLKMYVYNLDDDACREVTIKPNTAWGGEGALGCG 193
            |::::||::|:|.|..|::|.:.|:|.||.:|||:.|||.:.|:||||.:.||:||||||:||||
 Frog   131 LQSHTDYIVGSDQILQESEDFYALVEAHEGKPLKLLVYNTETDSCREVFVTPNSAWGGEGSLGCG 195

  Fly   194 IGFGYLHRIPVQ-AEPVTSSSAAVPAAAAAESTAPLLTAGGAAPAGAQVAQVVSPTLPYIPPLAN 257
            ||:|||||||:: |.|:.::          |.|.|                  ||..|...||. 
 Frog   196 IGYGYLHRIPLKPASPIKNT----------EITPP------------------SPLTPKEEPLV- 231

  Fly   258 TFGSTNAEVRPPTIEPPAQSLFKTYFNPDEATDALTAALESQATIAEPVSVPAPPAVADVSVAQP 322
                           ||.....:|..   .|.|..|.|.|      |.:::|.         :..
 Frog   232 ---------------PPTNGYRETAL---MAGDGQTDATE------EAINLPG---------STE 263

  Fly   323 QVQVPAPAQP---LPPPA-NIFIPGVFDPSTQQNANALGGIPAAQLPFPQAT-------AAPAAV 376
            |:.:..||:.   ||||. .:..|||.|||    |.::..||..:.....|:       |.||..
 Frog   264 QMDLGNPAESSLVLPPPVQRVLHPGVLDPS----ALSMPEIPDIKQLIDMASPASMDLAAEPAGT 324

  Fly   377 PMFSAPQ--QAYMSAPAALSYPAGAQTVPSYPQVQPSMGGLFPTQPTPLP--------------- 424
            ..|...:  :|:| ...:.|..|....:.|:| .:.|:    |....|||               
 Frog   325 KQFIGAEELEAFM-GQVSFSEGAAVDNLASHP-AEDSL----PAPGNPLPPHWGLEEVTSEMTFE 383

  Fly   425 ----PQMAHVFAPP----VPPQAGAAP 443
                |.::...|||    .||:....|
 Frog   384 NEQSPDVSDAAAPPEGDLTPPEQLVTP 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Grasp65NP_649160.1 PDZ <14..100 CDD:294084 52/85 (61%)
GRASP55_65 69..205 CDD:282364 86/135 (64%)
gorasp1NP_001004805.1 PDZ 3..102 CDD:320768 56/98 (57%)
GRASP55_65 71..205 CDD:309581 84/133 (63%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 228 1.000 Domainoid score I2432
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1366434at2759
OrthoFinder 1 1.000 - - FOG0002082
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1377
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.010

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