DRSC/TRiP Functional Genomics Resources

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Protein Alignment Grasp65 and gorasp2

DIOPT Version :9

Sequence 1:NP_649160.1 Gene:Grasp65 / 40177 FlyBaseID:FBgn0036919 Length:460 Species:Drosophila melanogaster
Sequence 2:NP_001004798.1 Gene:gorasp2 / 448025 XenbaseID:XB-GENE-943266 Length:423 Species:Xenopus tropicalis


Alignment Length:467 Identity:206/467 - (44%)
Similarity:261/467 - (55%) Gaps:102/467 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGSSHSIHVPGGGTEGYHVLKVQDNSPGQKAGLEAFFDFIVAIAGTRLDQDNDMLKELLRQNVDK 65
            ||.|:|:.:|||||||||||:||:||||.:||||.||||||:|.|.||::|||.||:||:.||:|
 Frog     1 MGGSNSVEIPGGGTEGYHVLRVQENSPGHRAGLEPFFDFIVSINGIRLNKDNDTLKDLLKANVEK 65

  Fly    66 PVRLTVYSSKTQTVRELTLTPSNNWGGQGLLGVSIRFCSFEGANESVWHILEVHPNSPAELAGLR 130
            ||::.||||||..:||.::||||.|||||||||||||||||||||:|||:|||.|||||.|||||
 Frog    66 PVKMVVYSSKTLELRETSVTPSNMWGGQGLLGVSIRFCSFEGANENVWHVLEVEPNSPAALAGLR 130

  Fly   131 AYSDYVIGADAIRHENDDLFTLIETHEQQPLKMYVYNLDDDACREVTIKPNTAWGGEGALGCGIG 195
            |:|||:||||.:.:|::|||:||||||.:|||:||||.|.|.||||.|.|||||||||:||||||
 Frog   131 AHSDYIIGADTVMNESEDLFSLIETHEGKPLKLYVYNTDTDNCREVVITPNTAWGGEGSLGCGIG 195

  Fly   196 FGYLHRIPVQ------------------AEPVTSSSAAVPAAAAAESTAPLLTAG-GAAPAGAQV 241
            :|||||||.:                  ..|:......|..:..:..|.||.||| .|:.:|..:
 Frog   196 YGYLHRIPTRPFEEGKNISMPGQVPGAPVSPLKDGFTEVQLSVNSPPTLPLGTAGIEASMSGLSI 260

  Fly   242 ---AQVVS-------PTLPYIPPLANTFGSTNAEVRPPTIEPPAQSLFKTYFNPDEATDALTAAL 296
               :.|||       ||:|.|.|..|           |::.|.|       .||           
 Frog   261 GASSPVVSSAINAGLPTVPVITPQIN-----------PSLAPVA-------LNP----------- 296

  Fly   297 ESQATIAEPVSVPAPPAVADVSVAQPQVQVPAPAQPLPPPANIFIPGVFDPSTQQNANALGGIPA 361
                    .||:   |::..:|...|.:|.......:..||...||....|...|   |:.|:|.
 Frog   297 --------AVSL---PSIMPLSTGLPHLQNLPNLPNINMPAPHLIPRTGLPDLSQ---AVAGLPP 347

  Fly   362 AQLPFPQATAAPAAVPMFSAPQQAYMSAPAALSYPAGAQTVPSYPQVQPSMGGLFPTQPTP---- 422
            .. |.|....  ..:|....|.|                 .|::| :.|.:|.:    |.|    
 Frog   348 LG-PLPHLNL--TGMPPLPVPSQ-----------------FPAFP-LAPMVGDI----PPPLLDH 387

  Fly   423 -LPPQMAHVFAP 433
             |.|...||.||
 Frog   388 SLAPTTEHVTAP 399

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Grasp65NP_649160.1 PDZ <14..100 CDD:294084 60/85 (71%)
GRASP55_65 69..205 CDD:282364 103/135 (76%)
gorasp2NP_001004798.1 PDZ <14..100 CDD:381812 60/85 (71%)
GRASP55_65 69..205 CDD:367964 103/135 (76%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 228 1.000 Domainoid score I2432
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 338 1.000 Inparanoid score I2333
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1366434at2759
OrthoFinder 1 1.000 - - FOG0002082
OrthoInspector 1 1.000 - - oto102284
Panther 1 1.100 - - O PTHR12893
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1703
SonicParanoid 1 1.000 - - X1377
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.190

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