DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Grasp65 and gorasp2

DIOPT Version :9

Sequence 1:NP_649160.1 Gene:Grasp65 / 40177 FlyBaseID:FBgn0036919 Length:460 Species:Drosophila melanogaster
Sequence 2:NP_956997.1 Gene:gorasp2 / 393676 ZFINID:ZDB-GENE-040426-1659 Length:434 Species:Danio rerio


Alignment Length:453 Identity:201/453 - (44%)
Similarity:261/453 - (57%) Gaps:56/453 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGSSHSIHVPGGGTEGYHVLKVQDNSPGQKAGLEAFFDFIVAIAGTRLDQDNDMLKELLRQNVDK 65
            ||.|.|:.:||||:||||||:||:||||.:||||.||||||:|..|||::|||.||::|:.:|:|
Zfish     1 MGGSQSVEIPGGGSEGYHVLRVQENSPGHRAGLEPFFDFIVSINNTRLNKDNDTLKDILKASVEK 65

  Fly    66 PVRLTVYSSKTQTVRELTLTPSNNWGGQGLLGVSIRFCSFEGANESVWHILEVHPNSPAELAGLR 130
            ||::.||||||..:||.|:||||.|||||||||||||||||||||:|||:|||.|||||.|||||
Zfish    66 PVKMQVYSSKTLELREATVTPSNMWGGQGLLGVSIRFCSFEGANENVWHVLEVEPNSPAALAGLR 130

  Fly   131 AYSDYVIGADAIRHENDDLFTLIETHEQQPLKMYVYNLDDDACREVTIKPNTAWGGEGALGCGIG 195
            .::||:||||.:.:|::|||:||||||.:.||:||||.|.|.||||.|.||:||||||:||||||
Zfish   131 PHTDYIIGADTVMNESEDLFSLIETHEGKGLKLYVYNTDTDNCREVVITPNSAWGGEGSLGCGIG 195

  Fly   196 FGYLHRIPVQAEPV-TSSSAAVPAAAAAESTAPLLTAGGAAPAGAQVAQVVSPTLPYIPPLANTF 259
            :|||||||.:  |. .....:.|....:|..:||..........|.....||..||  ..|.::.
Zfish   196 YGYLHRIPTR--PFEEGKKISFPGHTPSEPVSPLKDGFTEVQLSAVTPPPVSQPLP--TGLEDSL 256

  Fly   260 GSTNAEVRPPTIEPPAQSLFKTYFNPDEA-TDALTAALESQATIAEPVSVPAPPAVADVSVAQPQ 323
            ...:....||||             |.|. |...|..|         :.....|.:.::.:..|.
Zfish   257 SGLSLSSAPPTI-------------PSELHTGVPTVPL---------LPTHVTPGLGNLPLINPS 299

  Fly   324 ------VQVPAPAQPLPPPANI-FIPGVFDPSTQQNANALGGIPAAQLPFPQATAAPAAVPMFSA 381
                  :.:||...|||...|: .:|.:..|....:|.:|.||..    .|..||...::|..:.
Zfish   300 TNGPGLMSLPAGLPPLPNLPNLPNLPNLNLPLPDLSAVSLAGISG----LPPTTAGFPSLPPLNL 360

  Fly   382 PQQAYMSAPAALSYPAGAQTVPSYPQVQPSMGGLFPTQPTPLPPQMAHVFAPPVPPQAGAAPA 444
            |..:.:..|:.||     .|:||.|.|         |.|:||.|.   ...|||.......||
Zfish   361 PGISPLPMPSVLS-----STLPSMPGV---------TLPSPLAPS---DLVPPVSKATEQTPA 406

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Grasp65NP_649160.1 PDZ <14..100 CDD:294084 58/85 (68%)
GRASP55_65 69..205 CDD:282364 100/135 (74%)
gorasp2NP_956997.1 PDZ <14..100 CDD:294084 58/85 (68%)
GRASP55_65 69..205 CDD:282364 100/135 (74%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170594729
Domainoid 1 1.000 222 1.000 Domainoid score I2524
eggNOG 1 0.900 - - E1_COG5233
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 339 1.000 Inparanoid score I2337
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1366434at2759
OrthoFinder 1 1.000 - - FOG0002082
OrthoInspector 1 1.000 - - otm25559
orthoMCL 1 0.900 - - OOG6_102404
Panther 1 1.100 - - O PTHR12893
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1703
SonicParanoid 1 1.000 - - X1377
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1413.790

Return to query results.
Submit another query.