DRSC/TRiP Functional Genomics Resources

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Protein Alignment Grasp65 and gorasp1b

DIOPT Version :9

Sequence 1:NP_649160.1 Gene:Grasp65 / 40177 FlyBaseID:FBgn0036919 Length:460 Species:Drosophila melanogaster
Sequence 2:XP_002666782.3 Gene:gorasp1b / 100330055 ZFINID:ZDB-GENE-141212-318 Length:350 Species:Danio rerio


Alignment Length:357 Identity:153/357 - (42%)
Similarity:200/357 - (56%) Gaps:58/357 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGSSHSIHVPGGGTEGYHVLKVQDNSPGQKAGLEAFFDFIVAIAGTRLDQDNDMLKELLRQNVDK 65
            ||...|:....|   ||||..||:|||.::||||.|||||::|..|||::::..|||||:.||:|
Zfish    15 MGLIQSVFATQG---GYHVHGVQENSPAERAGLEPFFDFILSIGHTRLNKESSTLKELLKANVEK 76

  Fly    66 PVRLTVYSSKTQTVRELTLTPSNNWGGQGLLGVSIRFCSFEGANESVWHILEVHPNSPAELAGLR 130
            ||:|.|||||...||||.|.|||.||||||||.|:|||||.||::.|||:|:|..|||||||||:
Zfish    77 PVKLQVYSSKVMRVRELELVPSNLWGGQGLLGASVRFCSFTGADQYVWHVLDVEVNSPAELAGLK 141

  Fly   131 AYSDYVIGADAIRHENDDLFTLIETHEQQPLKMYVYNLDDDACREVTIKPNTAWGGEGALGCGIG 195
            .||||:||||.:..|::|.|:|||..|.:.||:.|||...|.||||.|.||.||||.|:|||.:|
Zfish   142 PYSDYIIGADQVLQESEDFFSLIEACEGKSLKLLVYNTHTDRCREVLITPNAAWGGNGSLGCDVG 206

  Fly   196 FGYLHRIPVQAEPVTSSS----------------AAVPAAAAAESTAPLLTAGGAAPAGAQVAQV 244
            ||||||||:.  ||||..                ..|.:..|.|.|.   ..||:|...::    
Zfish   207 FGYLHRIPMC--PVTSEQHQNTPEHQENKHRSELFLVNSTDAEEKTD---AQGGSAQDTSE---- 262

  Fly   245 VSPTLPYIPPLANTFGSTNAEVRPPTIEPPAQSLFKTYFNPDEATDALTAAL-------ESQATI 302
                           .|...|:      .||.:|.:...:.....||.|::|       |.::.|
Zfish   263 ---------------DSALCEI------SPALALSECLDSSTSLLDASTSSLKADDDDEEEESAI 306

  Fly   303 AEPVSVPAPPAVADVSVAQPQVQVPAPAQPLP 334
            :.| .:.:...:.|..:.:.|.. ||.....|
Zfish   307 SSP-KISSSVLLEDSGICESQTS-PAIINTTP 336

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Grasp65NP_649160.1 PDZ <14..100 CDD:294084 54/85 (64%)
GRASP55_65 69..205 CDD:282364 89/135 (66%)
gorasp1bXP_002666782.3 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170594730
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1366434at2759
OrthoFinder 1 1.000 - - FOG0002082
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_102404
Panther 1 1.100 - - O PTHR12893
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1377
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
76.850

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