DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pfdn6 and Pfdn2

DIOPT Version :9

Sequence 1:NP_001262079.1 Gene:Pfdn6 / 40176 FlyBaseID:FBgn0036918 Length:125 Species:Drosophila melanogaster
Sequence 2:NP_001102946.1 Gene:Pfdn2 / 685607 RGDID:1591406 Length:154 Species:Rattus norvegicus


Alignment Length:99 Identity:27/99 - (27%)
Similarity:50/99 - (50%) Gaps:10/99 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 IESYQNLQKSCLKMVKQRAVLESQLNENKCVLDELNLLGPDNKVYKLFGPVLVKQ-------ELE 73
            |..:..|::....:..:.|.||.:|||:..|:|.|..:....|.|::.|.|||::       .||
  Rat    27 IAGFNRLRQEQRGLASKAAELEMELNEHSLVIDTLKEVDETRKCYRMVGGVLVERTVKEVLPALE 91

  Fly    74 ESRQNVGKRIEYISKELKSSTDALENMEKDMLKH 107
            .:::.:.|.||.:|::|::....|....:   ||
  Rat    92 GNKEQIQKIIETLSQQLQAKGKELNEFRE---KH 122

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pfdn6NP_001262079.1 Prefoldin_beta 12..116 CDD:238345 27/99 (27%)
Pfdn2NP_001102946.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..20
Prefoldin_2 27..128 CDD:396482 27/99 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 126..154
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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