DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prp3 and AT1G28060

DIOPT Version :9

Sequence 1:NP_649156.1 Gene:Prp3 / 40172 FlyBaseID:FBgn0036915 Length:598 Species:Drosophila melanogaster
Sequence 2:NP_001319094.1 Gene:AT1G28060 / 839699 AraportID:AT1G28060 Length:786 Species:Arabidopsis thaliana


Alignment Length:716 Identity:219/716 - (30%)
Similarity:334/716 - (46%) Gaps:158/716 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 DGDDQKLSKKRAAASDSKSGGGSALEAPKKSRFDVPEKNGGGGEKK---EEVAVPASLSSTQIK- 69
            :|..:|.|:.:....:.::|   |.:..|||||     ..|.||::   |:||:.......|:. 
plant    90 EGSKEKESRSKRKDREEENG---ARDGKKKSRF-----ADGNGERRSRFEDVAIEVENKDAQVSE 146

  Fly    70 -----------LMMAHAQREIEERKRA---------LSNLRDKDPLLASV----------PSIGM 104
                       .|.|.....|.....|         :|::...|...|||          .:.|.
plant   147 GSGATNPTSGVTMGASTYSSIPSEASAAPSQTLLTKVSSISTTDENKASVVRSHEVPGKSSTDGR 211

  Fly   105 PVALATQALAKKPTPED--SEKARKIAELQAQIRAKL---------------------------- 139
            |::.|.::.|..|....  :.||||..:||..:..:|                            
plant   212 PLSTAGKSSANLPLDSSALAAKARKALQLQKGLADRLKNLPLLKKATKPTSEGSPHTRVPPSTTT 276

  Fly   140 ----TG-NLASLIQPTAVAAAAAAA---------------------------------------- 159
                || :.||.:..|.:|...:.|                                        
plant   277 PAVSTGTSFASTLPHTGLAGFGSIANIEAVKRAQELAANMGFHQDREFAPVINLFPGQAPSDMTV 341

  Fly   160 AQAQERPKPLILDDEGRTVDKSGRTINI--PTVTPTLKANIRAKKREVF-----QRQTGLGERSE 217
            ||..|:|..|.:|..||.:|:.|..|::  |:...|||.||..||::.|     |.:..|.|.  
plant   342 AQRPEKPPVLRVDALGREIDEHGNVISVTKPSNLSTLKVNINKKKKDAFQILKPQLEADLKEN-- 404

  Fly   218 SGTSAQEEAIKYFDDRIAL--KPTVRTKR-TLRFHEPGKFQQLAERMRMKS-----QLERLQNEI 274
                      .|||.|:.:  |..:|.|| :.:|.|.||:.:.||.::.||     :.:.|:.:.
plant   405 ----------PYFDTRMGIDEKKILRPKRMSFQFVEEGKWTRDAENLKFKSHFGEAKAKELKVKQ 459

  Fly   275 SQIARKTGISSATKLALI--APKQDMP-DDVPAMEWWDSVILTQDL--ETVDDASGKISIRQTAI 334
            :|:|:.....:...:.:.  .|:::.| :.:|.:||||:.:||...  |..|....:..::...:
plant   460 AQLAKANDDINPNLIEVSERVPRKEKPKEPIPDVEWWDANVLTNGEYGEITDGTITESHLKIEKL 524

  Fly   335 TNLIEHPTQMKPPNEPLKPVYLPVFLTKKERKKLRRQNRREAWKEEQEKIRLGLVAPPEPKLRIS 399
            |:.||||..::||.|...|...|:.|||||:||||.|.|....||:||.||.||:.||:.|:::|
plant   525 THYIEHPRPIEPPAEAAPPPPQPLKLTKKEQKKLRTQRRLAKEKEKQEMIRQGLLEPPKAKVKMS 589

  Fly   400 NLMRVLGSEAVQDPTKMEQHVRDQMAKRQKAHEDANNARKLTSEQKSEKKQRKLRED-TSCGVHV 463
            |||:||||||.|||||:|:.:|...|:|::||.|.|.|||||..:|.|||:|||.:| |:....|
plant   590 NLMKVLGSEATQDPTKLEKEIRTAAAEREQAHTDRNAARKLTPAEKREKKERKLFDDPTTVETIV 654

  Fly   464 SVYRIRDLQDNQSKKFKVETNAKQLQMTGSVVLFRDCCVVVVEGGPKQQKKYRRLMLTRIKWEE- 527
            |||:|:.| .:...:||||.||::.::||..|:..:..||||||..|..|:|.:||:.||.||| 
plant   655 SVYKIKKL-SHPKTRFKVEMNARENRLTGCSVMTDEMSVVVVEGKSKAIKRYGKLMMKRINWEEA 718

  Fly   528 DNAKGNDGQDVP----NSCVLVWEGTSQRRHFGEIKFKIFPMEKMAREFFQKHQVEHYWDLA--Y 586
            :..:||:.::..    |.|.|||:|:..:..|..........|..|::.|....|.||||||  |
plant   719 ERKEGNEDEEEEVNGGNKCWLVWQGSIGKPSFHRFHVHECVTESTAKKVFMDAGVVHYWDLAVNY 783

  Fly   587 S 587
            |
plant   784 S 784

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prp3NP_649156.1 PRP3 229..441 CDD:285741 88/224 (39%)
DUF1115 466..585 CDD:284060 45/123 (37%)
AT1G28060NP_001319094.1 SF-CC1 38..>105 CDD:273721 3/14 (21%)
PRP3 404..631 CDD:400749 88/238 (37%)
DUF1115 657..780 CDD:399506 45/123 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 151 1.000 Domainoid score I1403
eggNOG 1 0.900 - - E1_KOG2769
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H3447
Inparanoid 1 1.050 268 1.000 Inparanoid score I930
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1322299at2759
OrthoFinder 1 1.000 - - FOG0004423
OrthoInspector 1 1.000 - - otm3276
orthoMCL 1 0.900 - - OOG6_102616
Panther 1 1.100 - - LDO PTHR14212
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3705
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1413.830

Return to query results.
Submit another query.