DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prp3 and AT3G55935

DIOPT Version :9

Sequence 1:NP_649156.1 Gene:Prp3 / 40172 FlyBaseID:FBgn0036915 Length:598 Species:Drosophila melanogaster
Sequence 2:NP_001327931.1 Gene:AT3G55935 / 28719407 AraportID:AT3G55935 Length:137 Species:Arabidopsis thaliana


Alignment Length:113 Identity:28/113 - (24%)
Similarity:50/113 - (44%) Gaps:15/113 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   395 KLRISNLMRVLGSEAVQDPTKMEQHVRDQMAKRQKAHEDANNARKLTSEQKSEKKQRKLR----- 454
            |.|.|..:|  |....:|.|| ..|.|.....::|..|:.|...:.|:::...:...:..     
plant     5 KERYSKSIR--GDRDERDRTK-HHHERSHEGSKRKDREEENGTARATNKKSRFEDVARFENRPYT 66

  Fly   455 -----EDTSCGVHVSVYRIRDLQDNQSKKF--KVETNAKQLQMTGSVV 495
                 |.||..:.|:|.|.:||...|:|.|  :|:...:::...|:|:
plant    67 CSIASETTSGQIIVAVKRFQDLAHKQTKGFVLRVDALGREIDEHGNVI 114

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prp3NP_649156.1 PRP3 229..441 CDD:285741 13/45 (29%)
DUF1115 466..585 CDD:284060 9/32 (28%)
AT3G55935NP_001327931.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1322299at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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