DRSC/TRiP Functional Genomics Resources

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Protein Alignment Su(Tpl) and oclnb

DIOPT Version :10

Sequence 1:NP_649155.3 Gene:Su(Tpl) / 40171 FlyBaseID:FBgn0014037 Length:1059 Species:Drosophila melanogaster
Sequence 2:XP_005171901.1 Gene:oclnb / 494075 ZFINID:ZDB-GENE-041212-43 Length:471 Species:Danio rerio


Alignment Length:156 Identity:36/156 - (23%)
Similarity:69/156 - (44%) Gaps:17/156 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   789 QQQQYHQQAKH-PSPSQQLAAAAHAY-----AHATADTDSSATPRYDFSQYVPIQTLEVRRRYKT 847
            |...|.|:..: ||.:..|.::....     |:...::.......|: ::|.||...:.|..||.
Zfish   321 QPMVYSQKPIYLPSSASDLTSSVSGLKGKLRAYDAGESGDELDTEYE-TEYPPIINEQERLEYKR 384

  Fly   848 EFESDYDEYRKLLTRVEDVRNRFQDLSERLESARRCDNGYGDYDHIKRQIVCEYERINNDRTIGE 912
            :|:.|:..|::|...::|:.....|....|:   |.:.|...:    ..::.||.|:.:.:...:
Zfish   385 DFDRDHMVYKRLQAELDDINQGLADADRELD---RLEEGSPQF----MDVMDEYNRLKSLKKSTD 442

  Fly   913 ---DKERFDYLHAKLAHIKQLVMDYD 935
               .|.:...|.:||:.||:.|.|||
Zfish   443 YQMKKRKCKQLKSKLSLIKRRVSDYD 468

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Su(Tpl)NP_649155.3 ELL 16..462 CDD:463068
Occludin_ELL 833..936 CDD:462140 28/106 (26%)
oclnbXP_005171901.1 Occludin_ELL 370..468 CDD:462140 26/104 (25%)
Blue background indicates that the domain is not in the aligned region.

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