DRSC/TRiP Functional Genomics Resources

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Protein Alignment Su(Tpl) and ell1

DIOPT Version :9

Sequence 1:NP_001163477.1 Gene:Su(Tpl) / 40171 FlyBaseID:FBgn0014037 Length:1059 Species:Drosophila melanogaster
Sequence 2:NP_595826.1 Gene:ell1 / 2541257 PomBaseID:SPBP23A10.14c Length:533 Species:Schizosaccharomyces pombe


Alignment Length:545 Identity:101/545 - (18%)
Similarity:184/545 - (33%) Gaps:188/545 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   346 GLTSSNSNSSS-----SSRSANSKSSGG-NKMSDVSRRNIRERLIHLLALKAFKKPELFARLKNE 404
            ||:||.:|:.|     |..||:...||. |....:   ::|.|:|.|||:.  .:.|.|.||:.:
pombe   162 GLSSSPTNTPSPNLPVSQPSASPHYSGDKNSAKGI---DLRTRVIQLLAIA--PETEDFLRLRTK 221

  Fly   405 GIRDRERNQITNILMDISTMSH-NTYNLRRQMWNDVDE-NWPFFSEQEVQQLKRRKPQNLTPPMS 467
            .    ..:::..:|.:::..:: |.:.|...::.||.. :|              :|.::     
pombe   222 A----SLSKLQALLPEVAWKNNMNQWELLNPVYKDVRVFDW--------------RPYSI----- 263

  Fly   468 SDAGSSTSGQSPTSTHTGSPPPPSSNGGPGGVGSGAGGTSMKRTSLEYDETMFSTVQPKKQRIS- 531
            :|..:..|..|....:...||                           |....|.:..|::.|: 
pombe   264 ADRNAVLSRMSNAFDNMQLPP---------------------------DAPERSLLVSKQKNITK 301

  Fly   532 -HYKKDTPPSGTSYSSAGVSMSLGSSGSSSRSRYTPPQRQPGPLDDHSTTDLSYNVLDNIVEFMS 595
             :.:|..||....                      |....|..:|.:|                .
pombe   302 LNNEKRIPPQLAQ----------------------PTSHVPSFIDTNS----------------P 328

  Fly   596 STAAATQQSMEQQQH--PRSNSSNNRRGSSSLAGTSNGGNNKDKRNSTGSNSSSSSGYETQQDRQ 658
            |..:.:..|..||||  |:.|:||    .|.|...|:........:.|||.||:.|    ..|..
pombe   329 SMPSISSVSSYQQQHRIPKLNASN----YSPLLSPSSHRKTSGNLSRTGSESSAVS----LSDTT 385

  Fly   659 RSTTPMSSNRSSASSSTTPPKLAASFVPAATSGSASGTSKQRMPPQQSDYNSYNSNNAQHVASNS 723
            ...||: |:..|..||||...|::..:          ..|.|.|||......:.::         
pombe   386 NLNTPI-SDIPSPGSSTTCSNLSSPHI----------KRKSRSPPQSLPSTPFPTS--------- 430

  Fly   724 KKRMGSVGPSGGSNGQRQRSASGSNSGYQQVPPPSSNSRSS-IQQQNQHQKQQVQQKQAPSQQQQ 787
                     |..:||..:.:|:.          |..|.:.: |.::.:.|:...::.:|.:::.:
pombe   431 ---------SSSTNGTLEPNANS----------PKKNEQDAWIAKKRRQQRYTTEEMRALAKRFR 476

  Fly   788 QQQQQYHQQAKHPSPSQQLAAAAHAYAHATADTDSSATPRYDFSQYVPIQTLEVRRRYKTEFESD 852
            :...:|          :.|.....:|    .|.:.:..|..:..|                    
pombe   477 ETYPRY----------KNLYLKVSSY----YDNNDTNNPNLNKLQ-------------------- 507

  Fly   853 YDEYRKLLTRVEDVRNRFQDLSERL 877
             ||...|.::::..:|...|.|..|
pombe   508 -DELISLHSQLKSWKNTLYDASSEL 531

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Su(Tpl)NP_001163477.1 ELL 16..460 CDD:287376 28/121 (23%)
Occludin_ELL 836..935 CDD:284669 7/42 (17%)
ell1NP_595826.1 ELL <63..269 CDD:287376 30/134 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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