DRSC/TRiP Functional Genomics Resources

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Protein Alignment Su(Tpl) and ell3

DIOPT Version :9

Sequence 1:NP_001163477.1 Gene:Su(Tpl) / 40171 FlyBaseID:FBgn0014037 Length:1059 Species:Drosophila melanogaster
Sequence 2:XP_002932307.1 Gene:ell3 / 100492932 XenbaseID:XB-GENE-999062 Length:608 Species:Xenopus tropicalis


Alignment Length:933 Identity:174/933 - (18%)
Similarity:303/933 - (32%) Gaps:391/933 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 VKLTDSAFRAIEEYQRDDNA--KRLQPGQRAKIQFVGNTGVIQFPRPATDANGIPNANGNGSDAT 100
            :||||||.|.:.::||...:  ..|||    .|.|.||.|.|:.|.|:      |.....     
 Frog    29 LKLTDSALRCLRDFQRGQGSGPSSLQP----VITFQGNQGYIKIPSPS------PGCEDR----- 78

  Fly   101 GAGGGGGRKFGFTI-----NNMEGTLECVQQ-----QQRSLGVLGAVTLRMRIHANEDVYDSTRT 155
                  .|.|.|.:     :..:.:.||::|     .::.|..:|::..::.:.|.::.|..||.
 Frog    79 ------VRIFAFYLSRESKDKPQSSFECIRQGTSWSGEKQLSCIGSIQDKITVCATDESYQLTRD 137

  Fly   156 KMAIAEETEKSKCIREIKPNQSDIGRKVKKPPSAIQSSASTASAFSSNSSNSGLTTTAFHHHSNS 220
            :::..|:...|:...||||..|...:..|.|                                  
 Frog   138 RVSQVEKETWSRTAIEIKPEASHRSKYAKIP---------------------------------- 168

  Fly   221 NNSGNNNNRSSSSSNSFNSNNHSRKLGSSPFNGLGVGSSSSSSAFASRSPNPSTLGAIGTVNGSG 285
                        :.|:..:|....:                    .||.|:.....|....|..|
 Frog   169 ------------AKNTVEANKEESQ--------------------CSRRPHVFLTPAAKKCNRVG 201

  Fly   286 VVGGRYGGGAASSLASTFANGISQGYHNLSGSSPRDSMTAGTSSATASSVISSRNKMPSGGLTSS 350
                                                                             
 Frog   202 ----------------------------------------------------------------- 201

  Fly   351 NSNSSSSSRSANSKSSGGNKMSDVSRRNIRERLIHLLALKAFKKPELFARLKNEGIRDRERNQIT 415
                                   |..|.::|.::||||||.:||.::.|||:..|...||:.::.
 Frog   202 -----------------------VENRPLQEWVVHLLALKPYKKQDIIARLEKAGENLREQKELL 243

  Fly   416 NILMDISTMS--HNTYNLRRQMWNDVDENWPFFSEQEVQQLK---RRKPQNLTPPMSSDAGSSTS 475
            ..|..:..::  ..:|:|:.:.:..|..:|..:|.:|.|.::   .||..|:          |.|
 Frog   244 ATLDLVGQLNPKDGSYSLKEEFYIQVQTDWVGYSPEERQHIESTLSRKHLNI----------SAS 298

  Fly   476 GQSPTSTHTGSPPPPSSNGGPGGVGSGAGGTSMKRTSLEYDETMFSTVQPKKQRISHYKKDTPPS 540
            ...|.|    .|.||                                     ||..|    .|||
 Frog   299 RNIPAS----MPAPP-------------------------------------QRTQH----GPPS 318

  Fly   541 GTSYSSAGVSMSLGSSGSSSRSRYTPPQRQPGPLDDHSTTDLSYNVLDNIVEFMSSTAAATQQSM 605
              |||||                                                          
 Frog   319 --SYSSA---------------------------------------------------------- 323

  Fly   606 EQQQHPRSNSSNNRRGSSSLAGTSNGGNNKDKRNSTGSNSSSSSGYETQQDRQRSTTPMSSNRSS 670
                  |...|.::|..:  |.|::.|:.|..:.|           ..::.::.||:|...|  |
 Frog   324 ------RGQHSESKRPHA--AETADNGSCKKIKTS-----------HLEKHQRHSTSPPVLN--S 367

  Fly   671 ASSSTTPPKLAASFVPAATSGSASGTSKQRMPPQQSDYNSYNSNNAQHVASNSKKRMGSVGPSGG 735
            .||..|.|:..||..|              :|...|.|:.:......:..|..|           
 Frog   368 NSSHQTSPETCASLCP--------------VPENHSVYSLHTHKKQSYHRSVPK----------- 407

  Fly   736 SNGQRQRSASGSNSGYQQVPPPSSNS-----RSSIQQQNQHQKQ----QVQQKQAPSQQQQQQQQ 791
                    :....|..:::|..:.||     |.:..|.:|.|||    :..:|:..|.:.::::.
 Frog   408 --------SQNRESHKEKIPREAQNSEKAKPRGATSQCSQAQKQSEWNKAGKKEQDSSEDEEEED 464

  Fly   792 QYHQQAKH-------PSPSQQLAAAAHAYAHATADTDSSATPRYDFSQYVPIQTLEVRRRYKTEF 849
            .:.::|..       |....|.|.:|         :.|:..|.| ..:|.||.:.:.|:.|:.:|
 Frog   465 DWEEEALQLERCLCSPEEKPQRAESA---------SPSAEIPDY-CKKYRPITSADQRQVYEKDF 519

  Fly   850 ESDYDEYRKLLTRVEDVRNRFQDLSERLESARRCDNGYGDYDHIKRQIVCEYERINNDRT-IGED 913
            .:||.||.:|..::..|::||..|..::   ::...|..::..:.::|:.||::...... ..|:
 Frog   520 TADYTEYLELHAKIGKVQDRFVRLGAKM---KKLQQGTVEHKMVGKKILAEYKKFKMTYPGYREE 581

  Fly   914 KERFDYLHAKLAHIKQLVMDYDK 936
            |.:.:|||.||:|||||:::|:|
 Frog   582 KAKCEYLHHKLSHIKQLILEYEK 604

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Su(Tpl)NP_001163477.1 ELL 16..460 CDD:287376 77/438 (18%)
Occludin_ELL 836..935 CDD:284669 29/99 (29%)
ell3XP_002932307.1 ELL 20..291 CDD:371023 75/436 (17%)
Occludin_ELL 503..604 CDD:369308 32/103 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 147 1.000 Domainoid score I4469
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 170 1.000 Inparanoid score I4000
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D170004at33208
OrthoFinder 1 1.000 - - FOG0002166
OrthoInspector 1 1.000 - - otm48969
Panther 1 1.100 - - LDO PTHR23288
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1874
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.160

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