DRSC/TRiP Functional Genomics Resources

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Protein Alignment Su(Tpl) and si:ch73-61d6.3

DIOPT Version :10

Sequence 1:NP_649155.3 Gene:Su(Tpl) / 40171 FlyBaseID:FBgn0014037 Length:1059 Species:Drosophila melanogaster
Sequence 2:XP_001341204.3 Gene:si:ch73-61d6.3 / 100001136 ZFINID:ZDB-GENE-091204-109 Length:532 Species:Danio rerio


Alignment Length:258 Identity:59/258 - (22%)
Similarity:104/258 - (40%) Gaps:59/258 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   693 ASGTSKQRMPPQQSDYNSYNSNNAQHVASNSKKRMGSVGPSGGSN--GQRQRS---ASGSNSGYQ 752
            ||....::|.|..:...|..|..|         :.|||..|...|  |..:||   .|...|..:
Zfish   318 ASMVFSEKMSPVLASAPSVGSIPA---------KTGSVFSSENHNVIGYPERSFSRPSHCTSPSR 373

  Fly   753 QVPPPSSNSRSSIQQQNQHQKQQVQQKQAPSQQQQQQQQQYHQQAKHPSPSQQLAAAAHAYAHAT 817
            :|....|:...:|::.:..:.:  ::::.|...:.|.:.:|....:                  |
Zfish   374 EVSSSPSDQTDTIRKPSAGRGK--RRRRNPELDESQYETEYTTGGE------------------T 418

  Fly   818 ADTDSSATPRYDFSQ------YVPIQTLEVRRRYKTEFESDYDEYRKLLTRVEDVRNRFQDLSER 876
            ||         ||.|      |..|.:...|..||.||::|...|::|...::|:.::...||..
Zfish   419 AD---------DFDQDLWTRLYPEITSDPQRHDYKKEFDTDLRSYKELCAEMDDINDQINKLSRE 474

  Fly   877 LESARRCDNGYGDYDHIKRQIVCEYERINNDRTIGE---DKERFDYLHAKLAHIKQLVMDYDK 936
            |::   .|.|...|..:..    ||.|:.:.:.:.:   .|.:...|..||.|||::|.:||:
Zfish   475 LDT---LDEGTSKYQAVAE----EYNRLKDLKRMPDYQNKKHQCRKLRHKLFHIKRMVKNYDR 530

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Su(Tpl)NP_649155.3 ELL 16..462 CDD:463068
Occludin_ELL 833..936 CDD:462140 29/105 (28%)
si:ch73-61d6.3XP_001341204.3 MARVEL 55..271 CDD:366555
Occludin_ELL 431..530 CDD:462140 29/105 (28%)
Blue background indicates that the domain is not in the aligned region.

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