Sequence 1: | NP_001014591.1 | Gene: | Mi-2 / 40170 | FlyBaseID: | FBgn0262519 | Length: | 1983 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001277637.1 | Gene: | Smarca1 / 93761 | MGIID: | 1935127 | Length: | 1062 | Species: | Mus musculus |
Alignment Length: | 1220 | Identity: | 341/1220 - (27%) |
---|---|---|---|
Similarity: | 517/1220 - (42%) | Gaps: | 305/1220 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 558 KYDMEEPPKFEESLDEADTRYKRIQRHKDKVGMKAND-DAEVLEERFYKNGVKPEWLIVQRVINH 621
Fly 622 RTARDGSTMYLVKWRELPYDKSTWEEEGDDIQGLRQAIDYYQDLRAVCTSETTQSRSKKSKKGRK 686
Fly 687 SKLKVEDDEDRPVKHYTPPPEKPTTDLKKKYEDQPAFLEGTGMQLHPYQIEGINWLRYSWGQGID 751
Fly 752 TILADEMGLGKTIQTVTFLYSLYKEGHCRGPFLVAVPLSTLVNWEREFELWAPDFYCITYIGDKD 816
Fly 817 SRAVIRENELSFEEGAIRGSKVSRLRTTQYKFNVLLTSYELISMDAACLGSIDWAVLVVDEAHRL 881
Fly 882 KSNQSKFFRILNSYTIAYKLLLTGTPLQNNLEELFHLLNFLSRDKFNDLQAFQGEFAD---VSKE 943
Fly 944 EQVKRLHEMLGPHMLRRLKTDVLKNMPSKSEFIVRVELSAMQKKFYKFILTKNYEALNSKSGGGS 1008
Fly 1009 CSLINIMMDLKKCCNHPYLFPSAAEEATTAAGGLYEINS-LTKAAGKLVLLSKMLKQLKAQNHRV 1072
Fly 1073 LIFSQMTKMLDILEDFLEGEQYKYERIDGGITGTLRQEAIDRFNAPGAQQFVFLLSTRAGGLGIN 1137
Fly 1138 LATADTVIIYDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVV 1202
Fly 1203 RPG--MGGKGANFTKQELDDILRFGTEDLFKEDDKEEAIHYDDKAVAELLDRTNRGIEEKESWAN 1265
Fly 1266 EYLSSFKVASYATKEEEEEEETEIIKQDAENSDPAYWVKLLRHHYEQHQEDVGRSLG------KG 1324
Fly 1325 KRVRKQVNY------------TDGGVVAADTTRDDSNWQD------------------------- 1352
Fly 1353 ---NGSEYNSEYSAGSDEDGGDDDFDDQNGAERKAKRRLERRDDRPLPPLLARVGGNIEVLGFNA 1414
Fly 1415 RQRKSFLNAIMRYGMPPQDAFNSQWLVRDLRGKSERNFKAYVSLFMRHLCEPGADNAETFADGVP 1479
Fly 1480 REGLSRQHVLTRIGVMSLIRKKVQEFEHINGYYSMPELILKPCEPVRSALKQDVAALEAPPTGGN 1544
Fly 1545 VDKSATTSNSVTPATSAAPSPAPASEKGEDKDKDSEKEKD--------KTSAEKSEVKQE----- 1596
Fly 1597 QEAEEDKKPGDVKQENPVEEAAGDTKPSDAEVKTEVAKTEPKEETKDPEVKEEPKTEEKEKEKVD 1661
Fly 1662 DKKPIPPTTVIDDDDDDVMIVKEDGELEKPSASSPKDQKAVAAATSAATG 1711 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Mi-2 | NP_001014591.1 | CHDNT | 138..190 | CDD:285335 | |
PHD1_CHD_II | 380..422 | CDD:277006 | |||
PHD2_CHD_II | 440..482 | CDD:277007 | |||
CHROMO | 490..558 | CDD:237991 | 341/1220 (28%) | ||
CHROMO | 615..667 | CDD:214605 | 11/51 (22%) | ||
SNF2_N | 734..1028 | CDD:278600 | 127/296 (43%) | ||
DEXDc | 751..907 | CDD:238005 | 60/155 (39%) | ||
Helicase_C | 1053..1167 | CDD:278689 | 70/113 (62%) | ||
DUF1087 | <1292..1337 | CDD:283996 | 14/62 (23%) | ||
DUF1086 | 1380..1517 | CDD:283992 | 24/136 (18%) | ||
CHDCT2 | 1756..1927 | CDD:285336 | |||
Smarca1 | NP_001277637.1 | PLN03142 | 2..1061 | CDD:215601 | 341/1220 (28%) |
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 27..61 | ||||
DBINO | <73..114 | CDD:290603 | 9/42 (21%) | ||
DEXDc | 207..346 | CDD:238005 | 60/155 (39%) | ||
DEAH box | 315..318 | 2/2 (100%) | |||
Helicase_C | 489..604 | CDD:278689 | 70/114 (61%) | ||
HAND | 750..848 | CDD:286232 | 15/108 (14%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 819..840 | 6/26 (23%) | |||
SANT | 851..890 | CDD:238096 | 12/48 (25%) | ||
SLIDE | 905..1017 | CDD:286233 | 21/153 (14%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
2 | 1.870 |