Sequence 1: | NP_001014591.1 | Gene: | Mi-2 / 40170 | FlyBaseID: | FBgn0262519 | Length: | 1983 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_199293.3 | Gene: | CHR4 / 834510 | AraportID: | AT5G44800 | Length: | 2223 | Species: | Arabidopsis thaliana |
Alignment Length: | 2069 | Identity: | 525/2069 - (25%) |
---|---|---|---|
Similarity: | 790/2069 - (38%) | Gaps: | 741/2069 - (35%) |
- Green bases have known domain annotations that are detailed below.
Fly 309 QKSDDSA--DEKEAPVSSKADNSAPAAQDDGSGAPVVRKKAKTKIGNKFKKKNKLKKTKNFPEGE 371
Fly 372 DGEHEHQDYCEVCQQGGEIILCDTCPRAYHLVCLEPELDEPPEGKWSCPHCEADGGA-------- 428
Fly 429 -----AEEEDDDEHQEFCRVCKDGGELLC--------------------------------CDSC 456
Fly 457 PSAY--HTFC-------------LNPPLDTIPDGDWRCPR------CSCPPL------------- 487
Fly 488 -----------------------TGKAEKIITWRWAQRSNDDG---------------------- 507
Fly 508 -------PSTSKGSKNSN-----------------SRVREY------FIKWHNMSYWHCE---WV 539
Fly 540 PEVQLDVHHPLMIR--------------------------------------------------- 553
Fly 554 -------SFQRKYDMEEPP-------KFEESLDEADTRYKRIQRHKDKVGMKAND-----DAEVL 599
Fly 600 EERFYKNGVK------------------------------------------------------- 609
Fly 610 -----------------PEWLIVQRVINHRTARDGSTMYLVKWRELPYDKSTWEE-EGDDIQGLR 656
Fly 657 QAIDYYQDLRAVCTSETTQSRSKKSKKGRKSKLKVEDDEDRPVKHYTPPPEKPTTDLKKKYEDQP 721
Fly 722 AFLEGTGMQLHPYQIEGINWLRYSWGQGIDTILADEMGLGKTIQTVTFLYSLYKEGHCRGPFLVA 786
Fly 787 VPLSTLVNWEREFELWAPDFYCITYIGDKDSRAVIRENELSFEEGAIRGSKVSRLRTTQYKFNVL 851
Fly 852 LTSYELISMDAACLGSIDWAVLVVDEAHRLKSNQSKFFRILNSYTIAYKLLLTGTPLQNNLEELF 916
Fly 917 HLLNFLSRDKFNDLQAFQGEFADVSKEEQVKRLHEMLGPHMLRRLKTDVLKNMPSKSEFIVRVEL 981
Fly 982 SAMQKKFYKFILTKNYEAL-NSKSGGGSCSLINIMMDLKKCCNHPYLFPSAAEEATTAAGGLYEI 1045
Fly 1046 NSL-TKAAGKLVLLSKMLKQLKAQNHRVLIFSQMTKMLDILEDFLEGE--QYKYERIDGGITGTL 1107
Fly 1108 RQEAIDRFNAPGAQQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQANKV 1172
Fly 1173 MIYRFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGGKGANFTKQELDDILRFGTEDLFK----ED 1233
Fly 1234 DKEEA-------------------------------------IHYDDKAVAELLDRTNRGIEEKE 1261
Fly 1262 SWA------NEYLSSFKVASY--ATKEEE------------------EEEETEIIKQDAENSDPA 1300
Fly 1301 YWVKLLRHHYEQHQEDVGRSLGKGKRVRKQVNYTDGGVVAADTTRDDSNWQDNGSEYNSEYSAGS 1365
Fly 1366 DEDGGDDDFD-------DQNGAERKAKRRLERRDDRPLPPLLAR--------VGGNIEVLGFNAR 1415
Fly 1416 QRKSFLNAIMRYGMPPQDAFNSQWLVRDLRGKSERNFKAYVSLFMRH------------------ 1462
Fly 1463 -LCEPGADNAETFADGVPREGLSRQHVLTRIG---------VMSLIRKKVQEFEHINGYYSMPEL 1517
Fly 1518 ILKPCEPVRSALKQDVAALEA-------PPTGGNVDKSATTSNSVTPATSAAPSPAPASEKGEDK 1575
Fly 1576 DKDSEKEKDKTSAEKSEVKQEQEAEEDKKPGDVKQENPVEEAAGDTK-------------PSDAE 1627
Fly 1628 VKTEVAKTEPKEET----KD----------PEVK----EEPKTEEKEKEKVDDKKPIPPTTVIDD 1674
Fly 1675 DDDDVMIVKEDGELEKPSA--SSPKDQKAVAAATSAATGATGKGAEDSLEVLKRKFMFNIADGGF 1737
Fly 1738 TELHTLWLNEEKAAVPGREYEIWHRRHDYWLLAGIVTHGYGRWQDIQND--IRFAIINEPFKMDV 1800
Fly 1801 GKGNFLEIKNKFLARRFKLLEQALVIEEQLRRAAYL-NLAQDPSHPAMSLNARFAEVECLAESHQ 1864
Fly 1865 HLSKESLAGNKPANAVLHKVLN-------QLEELLSDMKSDVSRLPATLARIPP 1911 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Mi-2 | NP_001014591.1 | CHDNT | 138..190 | CDD:285335 | |
PHD1_CHD_II | 380..422 | CDD:277006 | 21/41 (51%) | ||
PHD2_CHD_II | 440..482 | CDD:277007 | 12/94 (13%) | ||
CHROMO | 490..558 | CDD:237991 | 20/180 (11%) | ||
CHROMO | 615..667 | CDD:214605 | 16/52 (31%) | ||
SNF2_N | 734..1028 | CDD:278600 | 139/294 (47%) | ||
DEXDc | 751..907 | CDD:238005 | 74/155 (48%) | ||
Helicase_C | 1053..1167 | CDD:278689 | 76/115 (66%) | ||
DUF1087 | <1292..1337 | CDD:283996 | 17/44 (39%) | ||
DUF1086 | 1380..1517 | CDD:283992 | 31/172 (18%) | ||
CHDCT2 | 1756..1927 | CDD:285336 | 32/166 (19%) | ||
CHR4 | NP_199293.3 | PHD2_CHD_II | 78..119 | CDD:277007 | 21/40 (53%) |
HepA | 445..1168 | CDD:223627 | 290/770 (38%) | ||
CHROMO | 530..587 | CDD:214605 | 0/56 (0%) | ||
Chromo | 602..653 | CDD:278797 | 16/58 (28%) | ||
DEXDc | 708..860 | CDD:238005 | 74/156 (47%) | ||
Helicase_C | 1003..1119 | CDD:278689 | 76/116 (66%) | ||
DUF1087 | 1289..1339 | CDD:283996 | 17/53 (32%) | ||
SANT_TRF | 1705..1749 | CDD:212558 | 17/83 (20%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 1 | 1.000 | 79 | 1.000 | Domainoid score | I3028 |
eggNOG | 1 | 0.900 | - | - | E2759_KOG0383 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D54215at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000546 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_101931 | |
Panther | 1 | 1.100 | - | - | O | PTHR45623 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
8 | 7.820 |