DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mi-2 and ETL1

DIOPT Version :10

Sequence 1:NP_001014591.1 Gene:Mi-2 / 40170 FlyBaseID:FBgn0262519 Length:1983 Species:Drosophila melanogaster
Sequence 2:NP_178318.1 Gene:ETL1 / 814740 AraportID:AT2G02090 Length:763 Species:Arabidopsis thaliana


Alignment Length:740 Identity:235/740 - (31%)
Similarity:327/740 - (44%) Gaps:171/740 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   569 ESLDEADTRYKRIQRHKDKVGMKANDDAEVLEERFYKNGVKPEWLIVQRVINHRTARDGSTMYLV 633
            |.|.::|:..| |...:|   :...|:.||.|.:                :..|.||.|.     
plant    70 EDLGDSDSDVK-IVNGED---LLLEDEEEVEETK----------------VVMRAARVGR----- 109

  Fly   634 KWRELPYDKSTWEEEGDDIQGLRQAIDYYQDLRAVCTSETTQSRSKKSKKGRKSKLKVEDDEDRP 698
              |.:..|:...:::.|:                   :|::.|..:....|..|..:..:||| .
plant   110 --RFVIEDEEASDDDDDE-------------------AESSASEDEFGGGGGGSGGRRGEDED-V 152

  Fly   699 VKHYTPPPEKPTTDLKK-----------KYE---------------DQPAFLEGTGMQ--LHPYQ 735
            |........|.:.||:|           :|.               |.....|.:..|  |.|||
plant   153 VGKALQKCAKISADLRKELYGTSSGVTDRYSEVETSTVRIVTQNDIDDACKAEDSDFQPILKPYQ 217

  Fly   736 IEGINWLRYSWGQGID-TILADEMGLGKTIQTVTFLYSLYKEGHCRGPFLVAVPLSTLVNWEREF 799
            :.|:|:|...:.:||: .|||||||||||||.:|:|..|.:..:..||.||..|.|.|.|||||.
plant   218 LVGVNFLLLLYKKGIEGAILADEMGLGKTIQAITYLTLLSRLNNDPGPHLVVCPASVLENWEREL 282

  Fly   800 ELWAPDFYCITYIGDKDSRAVIRE-NELSFEEGAIRGSKVSRLRTTQYKFNVLLTSYELISM--- 860
            ..|.|.|..:.|.|...: |..|| |.||      :..|..       .|||||..|.|...   
plant   283 RKWCPSFTVLQYHGAARA-AYSRELNSLS------KAGKPP-------PFNVLLVCYSLFERHSE 333

  Fly   861 ----DAACLGSIDWAVLVVDEAHRLKSNQSKFFRILNSYTIA----YKLLLTGTPLQNNLEELFH 917
                |...|....|:.:::||||.||...|  :|..|..::|    .:|:||||||||:|.||:.
plant   334 QQKDDRKVLKRWRWSCVLMDEAHALKDKNS--YRWKNLMSVARNANQRLMLTGTPLQNDLHELWS 396

  Fly   918 LLNFLSRDKFNDLQAFQGEFADVSKEEQVKRLHEMLGPHMLRRLKTDVLKNMPSKSEFIVRVELS 982
            ||.|:..|.|........:..:....|.:.|:..:|||.:|||||:||::.:..|   |.|||..
plant   397 LLEFMLPDIFTTENVDLKKLLNAEDTELITRMKSILGPFILRRLKSDVMQQLVPK---IQRVEYV 458

  Fly   983 AMQKK---FYKFILTKNYEA--------LNSKSGGGSCSLI------NIMMDLKKCCNHPYL--- 1027
            .|::|   .||..: :.|.|        |:|||.......:      |.....:|..|||.|   
plant   459 LMERKQEDAYKEAI-EEYRAASQARLVKLSSKSLNSLAKALPKRQISNYFTQFRKIANHPLLIRR 522

  Fly  1028 ---------------------FPSAAEEATTAAGGL-----------YEINSLTKA--AGKLVLL 1058
                                 |..:.:.......|.           |.:|. ||.  :.|.|:|
plant   523 IYSDEDVIRIARKLHPIGAFGFECSLDRVIEEVKGFNDFRIHQLLFQYGVND-TKGTLSDKHVML 586

  Fly  1059 S-------KMLKQLKAQNHRVLIFSQMTKMLDILEDFLEGEQYKYERIDGGITGTLRQEAIDRFN 1116
            |       ::|..:|...||||||||.|.||||||..|:.....|.|:||....|.||..:|.||
plant   587 SAKCRTLAELLPSMKKSGHRVLIFSQWTSMLDILEWTLDVIGVTYRRLDGSTQVTDRQTIVDTFN 651

  Fly  1117 APGAQQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRN 1181
             .....|..||||||||.|:||..||||||:|.|:||..|.||..|.|||||...|.|:|.||::
plant   652 -NDKSIFACLLSTRAGGQGLNLTGADTVIIHDMDFNPQIDRQAEDRCHRIGQTKPVTIFRLVTKS 715

  Fly  1182 SVEERVTQVAKRKMMLTHLVVRPGM 1206
            :|:|.:.::||||::|...|:..|:
plant   716 TVDENIYEIAKRKLVLDAAVLESGV 740

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mi-2NP_001014591.1 CHDNT 138..191 CDD:462357
TNG2 <282..422 CDD:227367
PHD1_CHD_II 380..422 CDD:277006
PHD2_CHD_II 440..482 CDD:277007
CD1_tandem_CHD3-4_like 487..557 CDD:349314
CD2_tandem_CHD3-4_like 610..664 CDD:349309 7/53 (13%)
PLN03142 720..>1234 CDD:215601 204/563 (36%)
DUF1087 <1292..1334 CDD:461922
CHDII_SANT-like 1380..1517 CDD:461920
CHDCT2 1757..1902 CDD:462358
ETL1NP_178318.1 HepA <207..737 CDD:440319 202/551 (37%)
Blue background indicates that the domain is not in the aligned region.

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