Sequence 1: | NP_001014591.1 | Gene: | Mi-2 / 40170 | FlyBaseID: | FBgn0262519 | Length: | 1983 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_017449128.1 | Gene: | Chd5 / 691589 | RGDID: | 1582725 | Length: | 2000 | Species: | Rattus norvegicus |
Alignment Length: | 2131 | Identity: | 1108/2131 - (51%) |
---|---|---|---|
Similarity: | 1374/2131 - (64%) | Gaps: | 358/2131 - (16%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MASEEENDDNFQEEEEAQEDNAPAAELSNDSDAPLKPNQNDEDDDYDPEDSRRKKKGKKRKTRKG 65
Fly 66 EEKGRKKKKRKKN----ESEEDSDFVQHDEEVEYPSTSKRGRKRKE--EKQAAKE---------- 114
Fly 115 ----KESASSGMPSVEDVCSAFSVCNVEIEYSEEELQSLTTYKAFMHHVRPILQKENPKIAAPKL 175
Fly 176 VMLVAAKWREFCESNPHIQQEGGAAGSGGSAGQARSVT-----------GDEPEEPRSSRSSRNE 229
Fly 230 KPDDIYEEAVEEEEEEEEEEKKPRRKRSGRGKKGRRPSGKVPTLKIKL--LGKRKRDSSDEEQDA 292
Fly 293 SGASERDSDLEFERMLQKSDDSADEKEAPVSSKADNSAPAAQDDGSGAPVVRKKAKTKIGNKFKK 357
Fly 358 KNKLKKTKNFPEGEDGEHEHQDYCEVCQQGGEIILCDTCPRAYHLVCLEPELDEPPEGKWSCPHC 422
Fly 423 EADG--------------GAAEEEDDDEHQEFCRVCKDGGELLCCDSCPSAYHTFCLNPPLDTIP 473
Fly 474 DGDWRCPRCSCPPLTGKAEKIITWRWAQRSND-----DGPSTSKGSKN----SNSRVREYFIKWH 529
Fly 530 NMSYWHCEWVPEVQLDVHHPLMIRSFQRKYDMEEPPKFEESLDEADTRYKRIQRHKDKVGMKAND 594
Fly 595 DAEVLEERFYKNGVKPEWLIVQRVINHRTARDGSTMYLVKWRELPYDKSTWEEEGDDIQGLRQAI 659
Fly 660 DYYQDL-------RAVCTSETTQSRSKKSKKGRKSKLKVEDDEDRPVKHYTPPPEKPTTDLKKKY 717
Fly 718 EDQPAFLEGTGMQLHPYQIEGINWLRYSWGQGIDTILADEMGLGKTIQTVTFLYSLYKEGHCRGP 782
Fly 783 FLVAVPLSTLVNWEREFELWAPDFYCITYIGDKDSRAVIRENELSFEEGAIR-GSKVSRL-RTTQ 845
Fly 846 YKFNVLLTSYELISMDAACLGSIDWAVLVVDEAHRLKSNQSKFFRILNSYTIAYKLLLTGTPLQN 910
Fly 911 NLEELFHLLNFLSRDKFNDLQAFQGEFADVSKEEQVKRLHEMLGPHMLRRLKTDVLKNMPSKSEF 975
Fly 976 IVRVELSAMQKKFYKFILTKNYEALNSKSGGGSCSLINIMMDLKKCCNHPYLFPSAAEEATTAAG 1040
Fly 1041 GLYEINSLTKAAGKLVLLSKMLKQLKAQNHRVLIFSQMTKMLDILEDFLEGEQYKYERIDGGITG 1105
Fly 1106 TLRQEAIDRFNAPGAQQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQAN 1170
Fly 1171 KVMIYRFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGGKGANFTKQELDDILRFGTEDLFKED-- 1233
Fly 1234 -----------------------------------------DKEEA--IHYDDKAVAELLDRTNR 1255
Fly 1256 GIEEKE-SWANEYLSSFKVASYATKEEE--EEEETEIIKQDAENSDPAYWVKLLRHHYEQHQEDV 1317
Fly 1318 GRSLGKGKRVRKQVNYTDGGVVAADTTRDDSNWQDNGSEYNSEYSAGSDEDGGDDDFDD----QN 1378
Fly 1379 GAERKAKRRLERRDDRPLPPLLARVGGNIEVLGFNARQRKSFLNAIMRYGMPPQDAFNSQWLVRD 1443
Fly 1444 LRGKSERNFKAYVSLFMRHLCEPGADNAETFADGVPREGLSRQHVLTRIGVMSLIRKKVQEFEHI 1508
Fly 1509 NGYYSMPELI------LKPCEPVRSALKQDVAALEAPPTGGNVDKSATTSNSVTPATSAAPSPAP 1567
Fly 1568 ----------------ASEKGEDKDKDS--------------EKEKDKTSAEKSEVKQEQEAEED 1602
Fly 1603 KKPGDVKQENPVEEAAGDTKPSDAEV--KTEVAKTEPKEETKDPEVKEEPKTEEKEKEKVDDKKP 1665
Fly 1666 IPPTTVIDDDDDDVMIVKEDGELEKPSASSPKDQKAVAAATSAATGATGKGAEDSLEVLKRKFMF 1730
Fly 1731 NIADGGFTELHTLWLNEEKAAV-PGREYEIWHRRHDYWLLAGIVTHGYGRWQDIQNDIRFAIINE 1794
Fly 1795 PFKMDVGKGNFLEIKNKFLARRFKLLEQALVIEEQLRRAAYLNLAQDPSHPAMSLNARFAEVECL 1859
Fly 1860 AESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKSDVSRLPATLARIPPVAQRLQMSERSIL 1924
Fly 1925 SRLAATAGNASNAAQLMAQFPAGFQGTTLPAFTSGPAGNFANFRPQFSVPG 1975 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Mi-2 | NP_001014591.1 | CHDNT | 138..190 | CDD:285335 | 22/51 (43%) |
PHD1_CHD_II | 380..422 | CDD:277006 | 37/41 (90%) | ||
PHD2_CHD_II | 440..482 | CDD:277007 | 32/41 (78%) | ||
CHROMO | 490..558 | CDD:237991 | 27/76 (36%) | ||
CHROMO | 615..667 | CDD:214605 | 21/58 (36%) | ||
SNF2_N | 734..1028 | CDD:278600 | 222/295 (75%) | ||
DEXDc | 751..907 | CDD:238005 | 118/157 (75%) | ||
Helicase_C | 1053..1167 | CDD:278689 | 101/113 (89%) | ||
DUF1087 | <1292..1337 | CDD:283996 | 33/44 (75%) | ||
DUF1086 | 1380..1517 | CDD:283992 | 114/136 (84%) | ||
CHDCT2 | 1756..1927 | CDD:285336 | 148/170 (87%) | ||
Chd5 | XP_017449128.1 | None |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 442 | 1.000 | Domainoid score | I517 |
eggNOG | 1 | 0.900 | - | - | E2759_KOG0383 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H56712 | |
Inparanoid | 1 | 1.050 | 1991 | 1.000 | Inparanoid score | I48 |
OMA | 1 | 1.010 | - | - | QHG46056 | |
OrthoDB | 1 | 1.010 | - | - | D35578at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000546 | |
OrthoInspector | 1 | 1.000 | - | - | otm44821 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_101931 | |
Panther | 1 | 1.100 | - | - | O | PTHR45623 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X547 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
14 | 13.880 |