Sequence 1: | NP_001014591.1 | Gene: | Mi-2 / 40170 | FlyBaseID: | FBgn0262519 | Length: | 1983 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_699360.5 | Gene: | chd6 / 570753 | ZFINID: | ZDB-GENE-130530-559 | Length: | 2953 | Species: | Danio rerio |
Alignment Length: | 2165 | Identity: | 541/2165 - (24%) |
---|---|---|---|
Similarity: | 841/2165 - (38%) | Gaps: | 672/2165 - (31%) |
- Green bases have known domain annotations that are detailed below.
Fly 101 RGRKRKEEKQAAKEKESASSGMPSVEDVCSAFSVCNVEIEYSEEELQSLTTYKAFMHHVRPI--L 163
Fly 164 QKENPKI---------AAPKLVMLVAAKWREFCESNPHI-------------QQEGGAAGSGGSA 206
Fly 207 GQARSVTGDEPEEPRSSRSSRNEKPDDIYEEAVEEEEEEE--------EEEKKPRRKRSGRGKKG 263
Fly 264 RRPSGKVPTLKIKLLGKR--------KRDSSDEEQDA-------SGASERDSDLEFERMLQKSDD 313
Fly 314 SA---------DEKEAPVSSKADNSAPAAQDDGSGAPVVRKKAKTKIGNKFKKKNKLKKTKNFP- 368
Fly 369 EGEDGEHEHQDYCEVCQQG-GEIILCDTCPRAYHLVCLEPELDEPPEGKWSCPHCEADGGAAEEE 432
Fly 433 DDDEHQEFCRVCKDGGELLCCDSCPSAYHTFCLNPPLDTIPDGDWRCPRCSCPPLTGKAEKIITW 497
Fly 498 RWAQR--SNDDGPSTSKGSKNSNSRVREYFIKWHNMSYWHCEWVPEVQLDVHHPLMIRSFQRKYD 560
Fly 561 MEEPPKFEESLDEADTRYKRIQRHKDKVGMKANDDAEVLEERFYKNGVKPEWLIVQRVINHRTAR 625
Fly 626 DGS-----TMYLVKWRELPYDKSTWEEEGDDIQGLRQAIDYYQDLRAVCTSETTQSRSKKSKKGR 685
Fly 686 KSKLKVEDDEDRPVKHYTPPPEKPTTDLKKKYEDQPAFLEGTGMQLHPYQIEGINWLRYSWGQGI 750
Fly 751 DTILADEMGLGKTIQTVTFLYSLYKEGHCRGPFLVAVPLSTLVNWEREFELWAPDFYCITYIGDK 815
Fly 816 DSRAVIRENELSF--EEGAIRGSKVSRLRTTQYKFNVLLTSYELISMDAACLGSIDWAVLVVDEA 878
Fly 879 HRLKSNQSKFFRILNSYTIAYKLLLTGTPLQNNLEELFHLLNFLSRDKFNDLQAFQGEFADVSKE 943
Fly 944 EQVKRLHEMLGPHMLRRLKTDVLKNMPSKSEFIVRVELSAMQKKFYKFILTKNYEALNSKSGGGS 1008
Fly 1009 C-SLINIMMDLKKCCNHPYLFPSAAEE---------ATTAAGGLYEINSLTKAAGKLVLLSKMLK 1063
Fly 1064 QLKAQNHRVLIFSQMTKMLDILEDFLEGEQYKYERIDGGITGTLRQEAIDRFNAPGAQQFVFLLS 1128
Fly 1129 TRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRNSVEERVTQVAKR 1193
Fly 1194 KMMLTHLVVRPGMGGKGA-----NFTKQELDDILRFGTEDLFKEDDKEEAIHYDDKAVAELLDRT 1253
Fly 1254 NRGIEEKESWANEYLSSFKVASYATKEEEEEEETEIIKQDAENSDPAY---WVKLLRHHYEQHQE 1315
Fly 1316 DVGRSLGKGKRVRKQVNYTDGGVVAADTTRDDSNWQDNGSEYNSEYSAGSDEDGGDDDFDDQNGA 1380
Fly 1381 ERKAK-RRLERRDDRPLPPLLARVGGNIEVLGFNARQRKSFLN------------------AIMR 1426
Fly 1427 YGM------------------PPQDAFN---------SQWLVRDLRGKSERNFKAYVSLFMRHLC 1464
Fly 1465 EPGADNAETFADGVPREGLS--------RQH---VLTRIGVMSLIRKKVQEFEHINGYYSMPELI 1518
Fly 1519 LKPCEPVRSALKQDVAALEAPPT--GGNVDKSA-------------------------------T 1550
Fly 1551 TSNSVTPATSAAPSPAPASEKGEDKDKDSEKEKDKTSAEKSEVKQEQEAEEDKKPGDVKQENPVE 1615
Fly 1616 EAAGDTK-----------PSDAEVKTEVAK----------------------------------- 1634
Fly 1635 ---TEPKEETKDPEVKEEPKTEEKEKEKVDDKKPIPPTTVIDDDDDDVMIVKEDGELEKPSASSP 1696
Fly 1697 KDQKAVAAATSAATGATGKGAEDSLE---------------VLKRKFMFNIADGGFTELHTLWLN 1746
Fly 1747 EEKAA-----------------------------VPGREYEIWHR--RHDYWLLAGIVTHGYGRW 1780
Fly 1781 QDIQNDIRFAIINEPFKMDVGKGNFLEIKNKFLARRFKLLEQALVIEEQLRRAAYLNLAQDPSHP 1845
Fly 1846 AMSLNARFAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKSDVSRLPATLARI- 1909
Fly 1910 ----------PPVAQRLQMSERSILSRLAATAG--NASNAAQLMAQFPAGFQGTTLPAFTSGPAG 1962
Fly 1963 NFANFRPQFSVPGQLSNNSG 1982 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Mi-2 | NP_001014591.1 | CHDNT | 138..190 | CDD:285335 | 13/62 (21%) |
PHD1_CHD_II | 380..422 | CDD:277006 | 8/42 (19%) | ||
PHD2_CHD_II | 440..482 | CDD:277007 | 1/41 (2%) | ||
CHROMO | 490..558 | CDD:237991 | 15/69 (22%) | ||
CHROMO | 615..667 | CDD:214605 | 19/56 (34%) | ||
SNF2_N | 734..1028 | CDD:278600 | 141/296 (48%) | ||
DEXDc | 751..907 | CDD:238005 | 68/157 (43%) | ||
Helicase_C | 1053..1167 | CDD:278689 | 72/113 (64%) | ||
DUF1087 | <1292..1337 | CDD:283996 | 11/47 (23%) | ||
DUF1086 | 1380..1517 | CDD:283992 | 39/193 (20%) | ||
CHDCT2 | 1756..1927 | CDD:285336 | 34/183 (19%) | ||
chd6 | XP_699360.5 | CHROMO | 309..370 | CDD:237991 | 19/137 (14%) |
Chromo | 392..445 | CDD:278797 | 18/55 (33%) | ||
SNF2_N | 480..767 | CDD:278600 | 141/296 (48%) | ||
DEXDc | 496..645 | CDD:238005 | 68/158 (43%) | ||
Helicase_C | 799..913 | CDD:278689 | 72/113 (64%) | ||
BRK | 2562..2606 | CDD:197800 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |