DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mi-2 and tou

DIOPT Version :9

Sequence 1:NP_001014591.1 Gene:Mi-2 / 40170 FlyBaseID:FBgn0262519 Length:1983 Species:Drosophila melanogaster
Sequence 2:NP_001097270.1 Gene:tou / 36241 FlyBaseID:FBgn0033636 Length:3131 Species:Drosophila melanogaster


Alignment Length:847 Identity:163/847 - (19%)
Similarity:281/847 - (33%) Gaps:252/847 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 EEENDDNFQEEEEAQEDNAPAAELSNDSDAPLKPNQNDEDDDYDPEDSRRKKKGKKRKTRKGEEK 68
            |.|..:|.|.....::......:|.:|.|.|.:....|:..|::|:.::|.:.....:....|:|
  Fly  2213 ERELQENLQRFLGLEQPLGVNYKLKSDIDFPEEFLMPDKKGDWNPKVAKRVELALIEQLESLEDK 2277

  Fly    69 GRKKKKRKKN-------ESEEDSDFVQHDEEVEYPSTSKRGRKRKEEKQAAKEKESASSGMPSVE 126
            ......:.||       |||...|..:...|.::.|.....|:|..:.:|               
  Fly  2278 VASASMQLKNWQLPNRVESELTLDSQEDVTEEDFVSIIPMIRERIIDLEA--------------- 2327

  Fly   127 DVCSAFSVCNVEIEYSEEELQSLT---TYKAFMHHVRPILQKENPKIAAPKLVMLVAAKWREFCE 188
                     |:|..|.:..|.|.|   .......:.....|.:|...||..|:.:...:.::...
  Fly  2328 ---------NIERRYLKPPLGSQTGDAHLAVIAQNQHTTTQTQNSASAAAYLLQMQQQQQQQQLA 2383

  Fly   189 SNPHIQQEGGAAGS-----------------------GGSAGQARS--VTGDEP-----EEPRSS 223
            .....||:|..||:                       |.:.|.|.|  |.|..|     .||.|.
  Fly  2384 QQQQQQQQGSGAGNSLNPSSFNERTMALAAAAAASGPGNATGVANSAVVAGATPCESGSGEPNSG 2448

  Fly   224 RSS--------RNEKPDDI------YEEAVEEEEEEEE----------------------EEKKP 252
            .:|        |:||.:.|      :.:||.......:                      ..|..
  Fly  2449 NASPASNCDSDRDEKVEQIPKGLVQWRDAVSRSHTTAQLAMALYVLESCVAWDKSIMKAYATKNK 2513

  Fly   253 RRKRSGRGKKGRRPSGKVPTLKIKLLGKRKRDSSDEEQDASGASERDSD--------------LE 303
            ..|:....||...||.|         .::|::..:::...:|...:...              :.
  Fly  2514 SSKKKSSAKKQATPSKK---------QQQKKNKKEQQLTPNGKESKSKSAINKPENQAPLSIKIN 2569

  Fly   304 FERMLQKSDDSADEKEAPVSSKADNSAPAAQDDGSGAPVVRKKAKTKIGNKFKKKNKLKKTKNFP 368
            .:.:.|........|..|:.:|:..::|::..:.|       .:.:..|.:.|||:..|:.::..
  Fly  2570 LKALAQNGQCLLKTKTPPILTKSPTASPSSHPNTS-------DSDSDFGKRTKKKSGGKRRRSAN 2627

  Fly   369 EGEDGEHEHQ-DYCEVCQQG---GEIILCDTCPRAYHLVCLEPELDEPPEGKWSCPHCEADGGAA 429
            .....::.:. ..|:.|..|   .:::|||.|.:.||..|.:|::|..|:|.|.|..|       
  Fly  2628 NTNSSKYSNSLQNCQFCTSGENEDKLLLCDGCDKGYHTYCFKPKMDNIPDGDWYCYEC------- 2685

  Fly   430 EEEDDDEHQEFCRVC-----KDGGELLCCDSCPSAYHTFCLNPPLDTIPDGDWRCPRC--SCPP- 486
              .:...::..|.||     ...|:::.||.||.|||..|..|||..:|.|.|.|..|  ..|| 
  Fly  2686 --VNKATNERKCIVCGGHRPSPVGKMIYCDLCPRAYHADCYIPPLLKVPRGKWYCHGCISRAPPP 2748

  Fly   487 -------LTGKAEKIITWRWAQRSNDDGPSTSKGSKNSNSRVREYFIKWHNMSYWHCEWVPEVQL 544
                   .:|.:.|    ....|..:.|.|..:.|.||.:...|:..:         :.:|....
  Fly  2749 KKRSAGGTSGSSSK----SRRDRDRESGGSAKRRSDNSKTPAMEHMQQ---------QQMPLAGG 2800

  Fly   545 DVHHPLMIRSFQRKYDMEEPPKFEESLDE-----------------ADTRYKRIQRHKDKVGMKA 592
            |.||          :..::||....|.||                 :.|.|.. |.|       |
  Fly  2801 DSHH----------HHHQQPPSLNSSHDESMNSLPAAPLSPAHSVVSATNYDD-QHH-------A 2847

  Fly   593 NDDAEVLEERFYKNGVKPEWLIVQRVINHRTARDGSTMYLVKWRELP---------YDKSTWEEE 648
            |:..:. ..||:.:.:.|             :.:|:...|   .::|         |...|....
  Fly  2848 NNSVDG-SSRFHAHLIPP-------------SNNGTAALL---EDVPGGANVMPGVYPVYTPVAA 2895

  Fly   649 GDDIQGL-----RQAIDYYQDLRAVCTSETTQSRSKKSKKGRKSKLKVEDDEDRPVKHYTPPPEK 708
            |:...||     .|....:.::.|:.....|.:|::               ...|....||||..
  Fly  2896 GNFSAGLINQAPVQPAMPFANVVAMSPRAVTPTRTR---------------TPTPTPAPTPPPPP 2945

  Fly   709 PT 710
            ||
  Fly  2946 PT 2947

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mi-2NP_001014591.1 CHDNT 138..190 CDD:285335 10/54 (19%)
PHD1_CHD_II 380..422 CDD:277006 16/44 (36%)
PHD2_CHD_II 440..482 CDD:277007 19/46 (41%)
CHROMO 490..558 CDD:237991 12/67 (18%)
CHROMO 615..667 CDD:214605 9/65 (14%)
SNF2_N 734..1028 CDD:278600
DEXDc 751..907 CDD:238005
Helicase_C 1053..1167 CDD:278689
DUF1087 <1292..1337 CDD:283996
DUF1086 1380..1517 CDD:283992
CHDCT2 1756..1927 CDD:285336
touNP_001097270.1 HAT_MBD 953..1027 CDD:238691
ZapA 1021..1127 CDD:294720
MAP7 1043..1198 CDD:283355
RILP-like 1085..>1179 CDD:304877
DDT 1255..1317 CDD:280886
WHIM1 1406..1455 CDD:292246
WHIM3 2190..2224 CDD:292248 4/10 (40%)
PHD_BAZ2A_like 2640..2685 CDD:277020 16/44 (36%)
RanBP2-type Zn finger 2640..2659 CDD:275375 6/18 (33%)
RanBP2-type Zn finger 2680..2698 CDD:275376 4/26 (15%)
PHD 2695..2744 CDD:279022 20/48 (42%)
Bromo_BAZ2A_B_like 3027..3123 CDD:99935
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0383
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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