Sequence 1: | NP_001014591.1 | Gene: | Mi-2 / 40170 | FlyBaseID: | FBgn0262519 | Length: | 1983 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038968738.1 | Gene: | Chd2 / 308738 | RGDID: | 1310056 | Length: | 1840 | Species: | Rattus norvegicus |
Alignment Length: | 1988 | Identity: | 544/1988 - (27%) |
---|---|---|---|
Similarity: | 844/1988 - (42%) | Gaps: | 567/1988 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 58 KKRKTRKGEEKGRKKKKRKKNESEEDSDFVQHDEEVEYPST--SKRGRKRKEEKQAAKEKESASS 120
Fly 121 GMPSVEDVCSAFSVCNVEIEYSEEELQSLTTYKAFMHHVRPILQKENPKIAAPK-LVMLVAAKWR 184
Fly 185 EFCE--------------SNPHIQQEGGAAGSGGSAGQARSVTGDEPEEPRSSRSSRNEKPDDIY 235
Fly 236 EEAVEEEEEE-------EEEEKKPRRKRSGRGKKGRRPSGK--VPTLKIK-----LLGKRKRDSS 286
Fly 287 DEEQDASGASERDSDLEFERMLQKSDDSADEKEAPVSSKADNSAPAAQDDGSGAPVVRKKAKTKI 351
Fly 352 GNKFKKKNKLKKTKN--FPEGEDGEHEHQDYCEVCQQGGEIILCDTCPRAYHLVCLEPELDEPPE 414
Fly 415 GKWSCPHCEADGGAAEEEDDDEHQEFCRVCKDGGELLCCDSCPSAYHTFCLNPPLDTIPDGDWRC 479
Fly 480 PRCSCPPLTGKAEKIITWRWAQRSNDDGPSTSKGSKNSNSRVREYFIKWHNMSYWHCEWVPEVQL 544
Fly 545 DVHHPLMIRSFQRKYDMEEPPKFEESLDEADTRYKRIQRHKDKVGMKANDDAEVLE-ERFYKNGV 608
Fly 609 KPEWLIVQRVINHRTARD--GST---------------MYLVKWRELPYDKSTWEEEGDDIQGLR 656
Fly 657 QAIDYYQDLRAVCTSETTQSRSKKSKKGRKSKLKVEDDEDRPVKHYTPPPEKPTTDLKKKYEDQP 721
Fly 722 AFLEGTGMQLHPYQIEGINWLRYSWGQGIDTILADEMGLGKTIQTVTFLYSLYKEGHCRGPFLVA 786
Fly 787 VPLSTLVNWEREFELWAPDFYCITYIGDKDSRAVIRENELSFEEGAIRGSKVSRLRTTQYKFNVL 851
Fly 852 LTSYELISMDAACLGSIDWAVLVVDEAHRLKSNQSKFFRILNSYTIAYKLLLTGTPLQNNLEELF 916
Fly 917 HLLNFLSRDKFNDLQAFQGEFADVSKEEQVKRLHEMLGPHMLRRLKTDVLKNMPSKSEFIVRVEL 981
Fly 982 SAMQKKFYKFILTKNYEALNSKSGGGSCSLINIMMDLKKCCNHPYLF--PSAAEEATTAAGGLYE 1044
Fly 1045 INSLTKAAGKLVLLSKMLKQLKAQNHRVLIFSQMTKMLDILEDFLEGEQYKYERIDGGITGTLRQ 1109
Fly 1110 EAIDRFNAPGAQQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQANKVMI 1174
Fly 1175 YRFVTRNSVEERVTQVAKRKMMLTHLVVR-----------PGMGGKGAN-FTKQELDDILRFGTE 1227
Fly 1228 DLFKEDDKEEAIHYDDKAVAELL----DRTNRGIEEKESWANEYLSSFKVASYATKEEEEEEE-- 1286
Fly 1287 -----TEIIKQDAENSDPAYWVKLLRHHYEQHQEDVGRSLGKGKRVRKQVNYTDGGVVAADTTRD 1346
Fly 1347 DSNWQDNGSEYNSEYSAGSDEDGGDDDFDDQNGAERKAKRRLERRDDRPLPPLLARVGGNIEVLG 1411
Fly 1412 FNARQRKSFLNAIMRYGMP-------PQDAFNSQWLVRDLRGKSERNFKAYVSLFMRHLCEPGAD 1469
Fly 1470 NAETFADGVPREGLSRQHVLTRIGVMSLIRKKVQEFEHINGYYSMPELILKPCEPVRSALKQDVA 1534
Fly 1535 ALEAPPTGGNVDKSATTSN------------SVTPATSAAPS--PAPASEKGEDKD--------- 1576
Fly 1577 ----KDSEKEKDKTSAEKSEVKQEQ-EAEEDKKPGDVKQE------------NPVEEAAGDTKPS 1624
Fly 1625 DAEVKTEVAKTEPKEETKDPEVKEEP------KTEEKEKEKVDDKK------------------- 1664
Fly 1665 PI------PPTTVIDDDDDDV-----MIVKED--------GELEKPSASSPKDQKAVAAATSAAT 1710
Fly 1711 GATGKGAEDSLEVLKRKFMFNIADGGFTELHTLWLNEEKAAVPGREYEIWHRRHDYWLLAGIVTH 1775
Fly 1776 GYGRWQDIQNDIRFAIINEPFKMDVGKGNFLEIKNKFLARRFKLL--EQALVIEEQLRRAAYLNL 1838
Fly 1839 AQDPSHPAMSLNARFAEVECLAESHQHLSKESLAGNKP 1876 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Mi-2 | NP_001014591.1 | CHDNT | 138..190 | CDD:285335 | 8/66 (12%) |
PHD1_CHD_II | 380..422 | CDD:277006 | 3/41 (7%) | ||
PHD2_CHD_II | 440..482 | CDD:277007 | 2/41 (5%) | ||
CHROMO | 490..558 | CDD:237991 | 16/67 (24%) | ||
CHROMO | 615..667 | CDD:214605 | 19/68 (28%) | ||
SNF2_N | 734..1028 | CDD:278600 | 142/293 (48%) | ||
DEXDc | 751..907 | CDD:238005 | 75/155 (48%) | ||
Helicase_C | 1053..1167 | CDD:278689 | 70/113 (62%) | ||
DUF1087 | <1292..1337 | CDD:283996 | 4/44 (9%) | ||
DUF1086 | 1380..1517 | CDD:283992 | 33/143 (23%) | ||
CHDCT2 | 1756..1927 | CDD:285336 | 20/123 (16%) | ||
Chd2 | XP_038968738.1 | CD1_tandem_CHD1-2_like | 272..356 | CDD:349313 | 23/134 (17%) |
CD2_tandem_CHD1-2_like | 389..460 | CDD:349308 | 20/70 (29%) | ||
DEXHc_CHD2 | 477..713 | CDD:350812 | 113/251 (45%) | ||
PLN03142 | 481..>1034 | CDD:215601 | 274/576 (48%) | ||
CDH1_2_SANT_HL1 | 1143..1231 | CDD:408175 | 20/88 (23%) | ||
DUF4208 | 1484..1566 | CDD:404744 | 20/144 (14%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |