| Sequence 1: | NP_001014591.1 | Gene: | Mi-2 / 40170 | FlyBaseID: | FBgn0262519 | Length: | 1983 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001100889.1 | Gene: | Smarca5 / 307766 | RGDID: | 1308832 | Length: | 995 | Species: | Rattus norvegicus |
| Alignment Length: | 1122 | Identity: | 330/1122 - (29%) |
|---|---|---|---|
| Similarity: | 496/1122 - (44%) | Gaps: | 259/1122 - (23%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 626 DGSTMYLVKWRELPYDKSTWEEE-----GDDIQGLRQAIDYYQDLRAVCTSETTQSRSK------ 679
Fly 680 KSKKGRKSKL---------KVEDDEDRPVKHYTPPPEKPTTDLKKKYEDQPAFLEGTGMQLHPYQ 735
Fly 736 IEGINWLRYSWGQGIDTILADEMGLGKTIQTVTFLYSLYKEGHCRGPFLVAVPLSTLVNWEREFE 800
Fly 801 LWAPDFYCITYIGDKDSRAV-IRENELSFEEGAIRGSKVSRLRTTQYKFNVLLTSYELISMDAAC 864
Fly 865 LGSIDWAVLVVDEAHRLKSNQSKFFRILNSYTIAYKLLLTGTPLQNNLEELFHLLNFLSRDKFND 929
Fly 930 LQAFQGEFAD---VSKEEQVKRLHEMLGPHMLRRLKTDVLKNMPSKSEFIVRVELSAMQKKFYKF 991
Fly 992 ILTKNYEALNSKSGGGSCSLINIMMDLKKCCNHPYLFPSAAEEATTAAGGLYEIN-SLTKAAGKL 1055
Fly 1056 VLLSKMLKQLKAQNHRVLIFSQMTKMLDILEDFLEGEQYKYERIDGGITGTLRQEAIDRFNAPGA 1120
Fly 1121 QQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRNSVEE 1185
Fly 1186 RVTQVAKRKMMLTHLVVRPG-MGGKGAN-FTKQELDDILRFGTEDLFKEDDKEEAIHYDDKAVAE 1248
Fly 1249 LLDRTNRGIEEKESWANEYLSSFKVAS------------YATKEEEEEEETEII----------K 1291
Fly 1292 QDAENSDPAYWVKLLRHHYEQHQEDVGRSLGKGKRVRKQVNYTD-------------------GG 1337
Fly 1338 VVAADTTRDDSNWQDNGSEYNSEYSAGSDEDGGDDDFDDQNGAERKAKRRLERRDDRPLPPLLAR 1402
Fly 1403 VGGNIEVLGF---NARQRKSFLNAIMRYGMPPQDAFNSQWLVRDLRGKSERNFKAYVSLFMRHLC 1464
Fly 1465 EPGADNAETFADGVPREGLSRQHVLTRIGVMSLIRKKVQEFEHINGYYSMPELILKPCEPVRSAL 1529
Fly 1530 KQDVAALEAP------PTGGNVDKSATTSNSVTPATSAAPSPAPASEKGEDK-----------DK 1577
Fly 1578 DSEKE------------------KDKTSAEKSE--------VKQEQEAEEDKKPGDVKQENPVEE 1616
Fly 1617 AAGDTKPSDAEVKTEVA 1633 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Mi-2 | NP_001014591.1 | CHDNT | 138..190 | CDD:285335 | |
| PHD1_CHD_II | 380..422 | CDD:277006 | |||
| PHD2_CHD_II | 440..482 | CDD:277007 | |||
| CHROMO | 490..558 | CDD:237991 | |||
| CHROMO | 615..667 | CDD:214605 | 9/45 (20%) | ||
| SNF2_N | 734..1028 | CDD:278600 | 126/297 (42%) | ||
| DEXDc | 751..907 | CDD:238005 | 59/156 (38%) | ||
| Helicase_C | 1053..1167 | CDD:278689 | 69/113 (61%) | ||
| DUF1087 | <1292..1337 | CDD:283996 | 11/63 (17%) | ||
| DUF1086 | 1380..1517 | CDD:283992 | 24/139 (17%) | ||
| CHDCT2 | 1756..1927 | CDD:285336 | |||
| Smarca5 | NP_001100889.1 | SNF2_N | 126..406 | CDD:278600 | 126/297 (42%) |
| DEXDc | 143..282 | CDD:238005 | 59/156 (38%) | ||
| Helicase_C | 425..540 | CDD:278689 | 69/114 (61%) | ||
| HAND | 686..771 | CDD:286232 | 16/94 (17%) | ||
| SANT | 785..826 | CDD:197842 | 15/81 (19%) | ||
| SANT | 787..826 | CDD:238096 | 14/79 (18%) | ||
| SLIDE | 841..953 | CDD:286233 | 18/131 (14%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 1 | 0.960 | - | - | ||
| 3 | 2.870 | |||||