Sequence 1: | NP_001014591.1 | Gene: | Mi-2 / 40170 | FlyBaseID: | FBgn0262519 | Length: | 1983 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_595385.1 | Gene: | mit1 / 2541336 | PomBaseID: | SPBP35G2.10 | Length: | 1418 | Species: | Schizosaccharomyces pombe |
Alignment Length: | 1485 | Identity: | 405/1485 - (27%) |
---|---|---|---|
Similarity: | 626/1485 - (42%) | Gaps: | 373/1485 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 122 MPSVEDVCSAFSVCNVEIEYSEEELQSLTT-YKAFMHHVRPILQKENPKIAAPKLVMLVAAKWRE 185
Fly 186 FCESNPHIQQEGGAAGSGGSAGQARSVTGDEPEEPRSSRS-------SRNEKPDDIYEEAVEEEE 243
Fly 244 EEEEEEKKPRRKRSGRGKKGRRPSGKVPTLKIKLLGKRKRDS------SDE-EQDASGASERDSD 301
Fly 302 LEFERMLQKSDDSADEKEAPVSSKADNSAPAAQDDGSGAPVVRKKAKTKIGNKFKKKNKLKKTKN 366
Fly 367 ----------FPEGEDG-EHEHQDYCEVC------QQGGEIILCDTCPRAYHLVCLE-PELDE-- 411
Fly 412 ---PPEGKWSCPHCEAD-----------GGAAEEED--------DDEH----QEFCRVCKDGGEL 450
Fly 451 LCCDSCPSAYHTFCLNPPLDTIPDGDWR----------CPRCSCPPLTGKAEKIITWRWAQRSND 505
Fly 506 DGPSTSKGSKN--SNSRV----REYFIKWHNMSYWHC-----EWVPEVQLDVHHPLMIRSFQRKY 559
Fly 560 DMEEPPKFEESLDEADTRYKRIQRHKDKVGMKANDDAEVLEERFYKNGVKPEWLIVQRVINHRTA 624
Fly 625 RDGSTMYLVKWRELPYDKSTWEEEGDDIQGLRQAIDYYQDLRAVCTSETTQSRSKKSKKGRKSKL 689
Fly 690 KVEDDEDRPVKHYTPPPEKPTTDLKKKYEDQPAFLEGTGMQLHPYQIEGINWLRYSWGQGIDTIL 754
Fly 755 ADEMGLGKTIQTVTFLYSLYKEGHCRGPFLVAVPLSTLVNWEREFELWAPDFYCITYIGDKDSRA 819
Fly 820 VIRENELSFEEGAIRGSKVSRLRTTQYKFNVLLTSYELISMDAACLGSIDWAVLVVDEAHRLKSN 884
Fly 885 QSKFFRILNSYTIAYKLLLTGTPLQNNLEELFHLLNFLSRDKFNDLQAFQGEFADVSKE------ 943
Fly 944 EQVKRLHEMLGPHMLRRLKTDVLKNMPSKSEFIVRVELSAMQKKFYKFILTKNYEAL-------N 1001
Fly 1002 SKSGGG--SCSLINIMMDLKKCCNHPYLFPSAAEEATTAAGGLYEI--NSLTKAAGKLVLLSKML 1062
Fly 1063 KQLKAQNHRVLIFSQMTKMLDILEDFLEGEQYKYERIDGGITGTLRQEAIDRFNAPGAQQFVFLL 1127
Fly 1128 STRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRNSVEERVTQVAK 1192
Fly 1193 RKMMLTHLVVRPGMGGKGANF-TKQELDDILRFGTEDLFKEDDKEEAIHYDDKAVAELLDRTNRG 1256
Fly 1257 IEEKES----------------WANEYLSSFKVASYATKE----EEEEEETEIIKQ---DA--EN 1296
Fly 1297 SDPAYWVKLLRHHYEQHQ-EDVGRSLGKGKRVRKQVNYTDGGVVAADTTRDDSNWQDN-----GS 1355
Fly 1356 EYNSE------------------YSAGSDEDGGDDDFDDQNGAERKAKRRLERRDDRPLPPLLAR 1402
Fly 1403 VGGNIEVLGFNARQRKSFLNAIMRYGMPPQDAFNSQWLVRDLRGKSERNFKAYVS 1457 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Mi-2 | NP_001014591.1 | CHDNT | 138..190 | CDD:285335 | 11/52 (21%) |
PHD1_CHD_II | 380..422 | CDD:277006 | 13/53 (25%) | ||
PHD2_CHD_II | 440..482 | CDD:277007 | 9/51 (18%) | ||
CHROMO | 490..558 | CDD:237991 | 22/78 (28%) | ||
CHROMO | 615..667 | CDD:214605 | 10/51 (20%) | ||
SNF2_N | 734..1028 | CDD:278600 | 121/308 (39%) | ||
DEXDc | 751..907 | CDD:238005 | 57/155 (37%) | ||
Helicase_C | 1053..1167 | CDD:278689 | 61/113 (54%) | ||
DUF1087 | <1292..1337 | CDD:283996 | 13/50 (26%) | ||
DUF1086 | 1380..1517 | CDD:283992 | 11/78 (14%) | ||
CHDCT2 | 1756..1927 | CDD:285336 | |||
mit1 | NP_595385.1 | PHD | 214..268 | CDD:214584 | 13/53 (25%) |
SNF2_N | 559..847 | CDD:278600 | 120/307 (39%) | ||
DEXDc | 577..720 | CDD:238005 | 57/154 (37%) | ||
Helicase_C | 870..985 | CDD:278689 | 61/114 (54%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E2759_KOG0383 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000546 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | LDO | PTHR45623 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
5 | 4.870 |