Sequence 1: | NP_001014591.1 | Gene: | Mi-2 / 40170 | FlyBaseID: | FBgn0262519 | Length: | 1983 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001379931.1 | Gene: | isw-1 / 175944 | WormBaseID: | WBGene00002169 | Length: | 1009 | Species: | Caenorhabditis elegans |
Alignment Length: | 1076 | Identity: | 312/1076 - (28%) |
---|---|---|---|
Similarity: | 477/1076 - (44%) | Gaps: | 242/1076 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 674 TQSRSKKSKK----GRKSKLKVEDDEDRPVKHYTPPPEKPTTDLKKK-----YEDQPAFLEGTGM 729
Fly 730 QLHPYQIEGINWLRYSWGQGIDTILADEMGLGKTIQTVTFLYSLYKEGHCRGPFLVAVPLSTLVN 794
Fly 795 WEREFELWAPDFYCITYIGDKDSRAVIRENELSFEEGAIRGSKVSRLRTTQYKFNVLLTSYELIS 859
Fly 860 MDAACLGSIDWAVLVVDEAHRLKSNQSKFFRILNSYTIAYKLLLTGTPLQNNLEELFHLLNFLSR 924
Fly 925 DKFNDLQAFQGEFAD---VSKEEQVKRLHEMLGPHMLRRLKTDVLKNMPSKSEFIVRVELSAMQK 986
Fly 987 KFYKFILTKNYEALNSKSGGGSCSLINIMMDLKKCCNHPYLFPSA--AEEATTAAGGLYEINSLT 1049
Fly 1050 KAAGKLVLLSKMLKQLKAQNHRVLIFSQMTKMLDILEDFLEGEQYKYERIDGGITGTLRQEAIDR 1114
Fly 1115 FNAPGAQQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVT 1179
Fly 1180 RNSVEERVTQVAKRKMMLTHLVVRPG-MGGKGANFTKQELDDILRFGTEDLFKEDDKEEAIHYDD 1243
Fly 1244 KAVAELLDRTNRGIEEKESWANEYLSSFKVASYATKEEEEEEETEIIKQDAENSDPAYWVKLLRH 1308
Fly 1309 HYEQHQEDVGRSLGKG-------KRVRKQVNYTDGGVVAADTTRDDSNWQDNGSEYNSEYSAGSD 1366
Fly 1367 EDGGDDDFDDQNGAERKAKRRLERRDDRPLPPLLARVGGNIEVLGFNARQRKSFL---NAIMRY- 1427
Fly 1428 -----------GMPPQDA----FNSQWLVRDLRGKSERNFKAYVSLFMRHLCEPGADNAETFADG 1477
Fly 1478 VPREGLSRQHVLTRIGVMSLIRKKVQEFEHINGYYSM----------PELILKPCE--------- 1523
Fly 1524 -PVRSALKQDVAALEAP------PTGGNVDKSATTSNSVTPATSAAPSPAPASEKGEDKDKDSEK 1581
Fly 1582 EKDKTSAEKSEVKQE-------------------QEAEE------------DKKPGDVKQENPVE 1615
Fly 1616 EAAGDTKPSDAEVKTEVAKTEPKEETKDPEVKEEPK 1651 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Mi-2 | NP_001014591.1 | CHDNT | 138..190 | CDD:285335 | |
PHD1_CHD_II | 380..422 | CDD:277006 | |||
PHD2_CHD_II | 440..482 | CDD:277007 | |||
CHROMO | 490..558 | CDD:237991 | |||
CHROMO | 615..667 | CDD:214605 | |||
SNF2_N | 734..1028 | CDD:278600 | 114/296 (39%) | ||
DEXDc | 751..907 | CDD:238005 | 53/155 (34%) | ||
Helicase_C | 1053..1167 | CDD:278689 | 67/113 (59%) | ||
DUF1087 | <1292..1337 | CDD:283996 | 11/51 (22%) | ||
DUF1086 | 1380..1517 | CDD:283992 | 26/165 (16%) | ||
CHDCT2 | 1756..1927 | CDD:285336 | |||
isw-1 | NP_001379931.1 | PLN03142 | 48..1008 | CDD:215601 | 310/1073 (29%) |
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
3 | 2.870 |