| Sequence 1: | NP_001014591.1 | Gene: | Mi-2 / 40170 | FlyBaseID: | FBgn0262519 | Length: | 1983 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_031716.2 | Gene: | Chd1 / 12648 | MGIID: | 88393 | Length: | 1711 | Species: | Mus musculus |
| Alignment Length: | 1985 | Identity: | 539/1985 - (27%) |
|---|---|---|---|
| Similarity: | 855/1985 - (43%) | Gaps: | 545/1985 - (27%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 50 DSRRKKKGKKRKTRKGEEKGRKKKKRKKNESEEDSDFVQHDEEVEYPSTSKRGRKRKEEKQAAKE 114
Fly 115 KESAS-SGMPSVEDVCSAFSVCNVEIEYSEEELQSLTTYKAFMHHVRPILQKENPKIAAPKLVML 178
Fly 179 VAAKWREFCESNPHI----------------QQEGGAAGSGGSAGQARSVTGDEPEEPRSSRSSR 227
Fly 228 NEKPDDIYE--------EAVEEEEEEEEEEK----------KPRRKRSGRGKKGRRPS--GKVPT 272
Fly 273 LKIKLLGKRKR--DSSDEEQDASGASERDSDLEFERMLQKSDDSADEKEAPVSSKADNSAPAAQD 335
Fly 336 DGSGAPVVRKKAKTKIGNKFKKKNKLKKTKN--FPEGEDGEHEHQDYCEVCQQGGEIILCDTCPR 398
Fly 399 AYHLVCLEPELDEPPEGKWSCPHCEADGGAAEEEDDDEHQEFCRVCKDGGELLCCDSCPSAYHTF 463
Fly 464 CLNPPLDTIPDGDWRCPRCSCPPLTGKAEKIITWRWAQRSNDDGPSTSKGSKNSNSRVREYFIKW 528
Fly 529 HNMSYWHCEWVPEVQLDVHHPLMIRSFQR----KYDMEEPPKFEESLDEADTRYKRIQRHKDKVG 589
Fly 590 MKANDDAEVLEERFYKNGVKPEWLIVQRVINHRTARDGSTM--YLVKWRELPYDKSTWEEEGDDI 652
Fly 653 QGLRQAIDYYQDLRAVCTSETTQSRSKKSKKGRKSKLKVEDDEDRPVKHYTPPPEKPTTDLKKKY 717
Fly 718 EDQPAFLEG-TGMQLHPYQIEGINWLRYSWGQGIDTILADEMGLGKTIQTVTFLYSLYKEGHCRG 781
Fly 782 PFLVAVPLSTLVNWEREFELWAPDFYCITYIGDKDSRAVIRENELSFEEGAIRGSKVSRLRTTQY 846
Fly 847 KFNVLLTSYELISMDAACLGSIDWAVLVVDEAHRLKSNQSKFFRILNSYTIAYKLLLTGTPLQNN 911
Fly 912 LEELFHLLNFLSRDKFNDLQAFQGEFADVSKEEQVKRLHEMLGPHMLRRLKTDVLKNMPSKSEFI 976
Fly 977 VRVELSAMQKKFYKFILTKNYEALNSKSGGGSCSLINIMMDLKKCCNHPYLF--PSAAE-----E 1034
Fly 1035 ATTAAGGLYEINSLTKAAGKLVLLSKMLKQLKAQNHRVLIFSQMTKMLDILEDFLEGEQYKYERI 1099
Fly 1100 DGGITGTLRQEAIDRFNAPGAQQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAH 1164
Fly 1165 RIGQANKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVV-RPGMGGK-----------GANFTKQE 1217
Fly 1218 LDDILRFGTEDLFKEDDKEEAIHYDDKAVAELLDRTNRGIEEKE----SWANEYLSSFKVASYAT 1278
Fly 1279 KEEEE-EEETEIIKQDAENSDPAYWVKLLRHHYEQHQEDVGRS--------LGKGKRVRKQVNYT 1334
Fly 1335 DGGVVAADTTRDDSNWQDNGSE---YNSEYSAGSDEDGGDDDFDDQNGAERKAKRRLERRDDRPL 1396
Fly 1397 PPLLARVGGNIEVLGFNARQRKSFLNAIMRYGMPPQ--DAFNSQWLVRD--LRGKSERNFKAYVS 1457
Fly 1458 LFMRHLCEPGADNA-ETFADGVPREG--LSRQHVLT-RIGVMSLIRKKV--QEFEHINGYYSMPE 1516
Fly 1517 LILKPCEPVRSALKQDVAALEAPPTGGNVDKS------------ATTSNSVTPATSAAPSPAPAS 1569
Fly 1570 EKGEDKDKDSEKEKDKTSAE-----------KSEVKQ-------EQEAEEDKKPGDVKQENPVEE 1616
Fly 1617 AAGDTKPSDAEVKTEVAKTEPKEETKDPEVKE-EPKTEEKEKEKVDDKKPIPPTTVIDDDDDDVM 1680
Fly 1681 IVKEDGELEKPSASSPKDQKAVAAATSAATGATGKGAEDSLEVLK--RKFMFNIADGGFTELHTL 1743
Fly 1744 WLNEEKAAVPGREYEIWHRRHDYWLLAGIVTHGYGRWQDIQNDIRFAIINEPFKMDVGKGNFLEI 1808
Fly 1809 KNKFLARRF-KLLEQALVIEEQLRRAAYLNLAQDPSHPAMSLNARFAEVECLAE--SHQHLSKES 1870
Fly 1871 LAGNKPANAV--LHKVLNQLEELLSDMKSDVSRLP 1903 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Mi-2 | NP_001014591.1 | CHDNT | 138..190 | CDD:285335 | 11/51 (22%) |
| PHD1_CHD_II | 380..422 | CDD:277006 | 6/41 (15%) | ||
| PHD2_CHD_II | 440..482 | CDD:277007 | 4/41 (10%) | ||
| CHROMO | 490..558 | CDD:237991 | 15/71 (21%) | ||
| CHROMO | 615..667 | CDD:214605 | 15/53 (28%) | ||
| SNF2_N | 734..1028 | CDD:278600 | 139/293 (47%) | ||
| DEXDc | 751..907 | CDD:238005 | 70/155 (45%) | ||
| Helicase_C | 1053..1167 | CDD:278689 | 71/113 (63%) | ||
| DUF1087 | <1292..1337 | CDD:283996 | 7/52 (13%) | ||
| DUF1086 | 1380..1517 | CDD:283992 | 37/146 (25%) | ||
| CHDCT2 | 1756..1927 | CDD:285336 | 30/153 (20%) | ||
| Chd1 | NP_031716.2 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..250 | 68/367 (19%) | |
| CHROMO | 304..353 | CDD:237991 | 12/51 (24%) | ||
| Chromo | 388..441 | CDD:278797 | 16/62 (26%) | ||
| SNF2_N | 482..763 | CDD:278600 | 139/293 (47%) | ||
| DEXDc | 498..643 | CDD:238005 | 70/156 (45%) | ||
| DEAH box | 612..615 | 2/2 (100%) | |||
| HDA2-3 | 716..969 | CDD:288366 | 134/261 (51%) | ||
| Helicase_C | 801..900 | CDD:278689 | 63/98 (64%) | ||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1078..1119 | 16/78 (21%) | |||
| PRK12279 | <1276..1466 | CDD:138835 | 42/210 (20%) | ||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1322..1407 | 18/98 (18%) | |||
| DUF4208 | 1407..1498 | CDD:290618 | 25/137 (18%) | ||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1503..1588 | 20/78 (26%) | |||
| DUF1777 | 1581..>1697 | CDD:285811 | |||
| PHA03420 | 1591..>1691 | CDD:177648 | |||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1600..1657 | ||||
| 3 X 5 AA repeats of H-S-D-H-R | 1629..1645 | ||||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1670..1711 | ||||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 1 | 0.960 | - | - | ||
| 2 | 1.870 | |||||