Sequence 1: | NP_001014591.1 | Gene: | Mi-2 / 40170 | FlyBaseID: | FBgn0262519 | Length: | 1983 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_031761592.1 | Gene: | chd5 / 100487004 | XenbaseID: | XB-GENE-955461 | Length: | 1953 | Species: | Xenopus tropicalis |
Alignment Length: | 2092 | Identity: | 1109/2092 - (53%) |
---|---|---|---|
Similarity: | 1372/2092 - (65%) | Gaps: | 322/2092 - (15%) |
- Green bases have known domain annotations that are detailed below.
Fly 5 EENDDNFQEEEEAQEDNAPAAELSNDSDAPLKPNQNDEDDDYDPEDSRRKKKGKKRKTRKGEEKG 69
Fly 70 RKKKKRKKNESEEDSDFVQHDEEVEYPSTS------------KRGRKRKEEKQAAKEK----ESA 118
Fly 119 SSGM---PSVEDVCSAFSVCNVEIEYSEEELQSLTTYKAFMHHVRPILQKENPKIAAPKLVMLVA 180
Fly 181 AKWREFCESNPHIQQEGGAAGSGGSAGQARS--------VTGDEPEEPRSSRSSRNEKPDDIYEE 237
Fly 238 AVEEEEEEEEEEKKPR-RKRSGRGKKGRRPS--GKVPTLKIKLLG---KRKRDSSDEEQDASGAS 296
Fly 297 ERDSDLEFERMLQKSDDSADEKEAPVSSKADNSAPAAQDDGSGAPVVRKKAKTKIGNKFKKKNKL 361
Fly 362 KKTKNFPEGEDGEHEHQDYCEVCQQGGEIILCDTCPRAYHLVCLEPELDEPPEGKWSCPHC---- 422
Fly 423 -----------EADGGAAEEEDDDEHQEFCRVCKDGGELLCCDSCPSAYHTFCLNPPLDTIPDGD 476
Fly 477 WRCPRCSCPPLTGKAEKIITWRWAQRSNDDG-----------PSTSKGSKNSNSRVREYFIKWHN 530
Fly 531 MSYWHCEWVPEVQLDVHHPLMIRSFQRKYDMEEPPKFE-ESLDEADTRYKRIQRHKDKVGMKAND 594
Fly 595 DAEVLEERFYKNGVKPEWLIVQRVINHRTARDGSTMYLVKWRELPYDKSTWEEEGDDI---QGLR 656
Fly 657 QAIDYYQDLRAVCTSETTQSRSKKSKKGRKSKLKVEDDEDRPVKHYTPPPEKPTTDLKKKYEDQP 721
Fly 722 AFLEGTGMQLHPYQIEGINWLRYSWGQGIDTILADEMGLGKTIQTVTFLYSLYKEGHCRGPFLVA 786
Fly 787 VPLSTLVNWEREFELWAPDFYCITYIGDKDSRAVIRENELSFEEGAIR-GSKVSRL-RTTQYKFN 849
Fly 850 VLLTSYELISMDAACLGSIDWAVLVVDEAHRLKSNQSKFFRILNSYTIAYKLLLTGTPLQNNLEE 914
Fly 915 LFHLLNFLSRDKFNDLQAFQGEFADVSKEEQVKRLHEMLGPHMLRRLKTDVLKNMPSKSEFIVRV 979
Fly 980 ELSAMQKKFYKFILTKNYEALNSKSGGGSCSLINIMMDLKKCCNHPYLFPSAAEEATTAAGGLYE 1044
Fly 1045 INSLTKAAGKLVLLSKMLKQLKAQNHRVLIFSQMTKMLDILEDFLEGEQYKYERIDGGITGTLRQ 1109
Fly 1110 EAIDRFNAPGAQQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQANKVMI 1174
Fly 1175 YRFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGGKGANFTKQELDDILRFGTEDLFKED------ 1233
Fly 1234 --------------DKEEA--IHYDDKAVAELLDRTNRGIEEKE-SWANEYLSSFKVASYATKEE 1281
Fly 1282 E--EEEETEIIKQDAENSDPAYWVKLLRHHYEQHQEDVGRSLGKGKRVRKQVNYTDGGVVAADTT 1344
Fly 1345 RDDSNWQDNGSEYNSEYSAGSDEDGGDDDFDDQ-NGAERKAKRRLERRDDRPLPPLLARVGGNIE 1408
Fly 1409 VLGFNARQRKSFLNAIMRYGMPPQDAFNSQWLVRDLRGKSERNFKAYVSLFMRHLCEPGADNAET 1473
Fly 1474 FADGVPREGLSRQHVLTRIGVMSLIRKKVQEFEHINGYYSMPELI-----LKPC-EPVRSALKQD 1532
Fly 1533 VAALEAPPTGGNVD-------KSATTSNS----VTPATSAAPSPAPASEKGEDKD---------- 1576
Fly 1577 --KDSEKEKDKTSAEKSEVKQEQEAEEDKKPGDVKQENPVEEAAGDTKPSDAEVKTEVAKTEPKE 1639
Fly 1640 ETKDPEVKEEPKTEEKEKEKVDDKKPIPPTTVIDDDDDDVMIVKEDGELEKPSASSPKDQKAVAA 1704
Fly 1705 ATSAATGATGKGAEDSLEVLKRKFMFNIADGGFTELHTLWLNEEKAAV-PGREYEIWHRRHDYWL 1768
Fly 1769 LAGIVTHGYGRWQDIQNDIRFAIINEPFKMDVGKGNFLEIKNKFLARRFKLLEQALVIEEQLRRA 1833
Fly 1834 AYLNLAQDPSHPAMSLNARFAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKSD 1898
Fly 1899 VSRLPATLARIPPVAQRLQMSERSILSRLAATAGNASNAAQLMAQFPAGFQGTTLPAFTSGPAGN 1963
Fly 1964 FANFRPQFSVPG 1975 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Mi-2 | NP_001014591.1 | CHDNT | 138..190 | CDD:285335 | 23/51 (45%) |
PHD1_CHD_II | 380..422 | CDD:277006 | 37/41 (90%) | ||
PHD2_CHD_II | 440..482 | CDD:277007 | 32/41 (78%) | ||
CHROMO | 490..558 | CDD:237991 | 25/78 (32%) | ||
CHROMO | 615..667 | CDD:214605 | 21/54 (39%) | ||
SNF2_N | 734..1028 | CDD:278600 | 222/295 (75%) | ||
DEXDc | 751..907 | CDD:238005 | 118/157 (75%) | ||
Helicase_C | 1053..1167 | CDD:278689 | 102/113 (90%) | ||
DUF1087 | <1292..1337 | CDD:283996 | 32/44 (73%) | ||
DUF1086 | 1380..1517 | CDD:283992 | 112/136 (82%) | ||
CHDCT2 | 1756..1927 | CDD:285336 | 146/170 (86%) | ||
chd5 | XP_031761592.1 | CHDNT | 142..192 | CDD:400425 | 23/49 (47%) |
PHD1_CHD_II | 337..379 | CDD:277006 | 37/41 (90%) | ||
PHD2_CHD_II | 412..454 | CDD:277007 | 32/41 (78%) | ||
CD1_tandem_CHD3-4_like | 459..535 | CDD:349314 | 26/80 (33%) | ||
CD2_tandem_CHD3-4_like | 580..634 | CDD:349309 | 23/56 (41%) | ||
PLN03142 | 686..>1189 | CDD:215601 | 391/502 (78%) | ||
DEXHc_CHD5 | 688..919 | CDD:350815 | 171/230 (74%) | ||
DUF1087 | 1263..1316 | CDD:399459 | 38/53 (72%) | ||
DUF1086 | 1351..1492 | CDD:368921 | 113/140 (81%) | ||
MDN1 | <1530..1664 | CDD:227596 | 36/168 (21%) | ||
CHDCT2 | 1697..1823 | CDD:400426 | 107/125 (86%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 441 | 1.000 | Domainoid score | I538 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 1 | 1.000 | - | - | H56712 | |
Inparanoid | 1 | 1.050 | 1992 | 1.000 | Inparanoid score | I54 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D35578at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000546 | |
OrthoInspector | 1 | 1.000 | - | - | otm47866 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X547 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
7 | 7.060 |