DRSC/TRiP Functional Genomics Resources

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Protein Alignment LOXL2 and Loxl2

DIOPT Version :9

Sequence 1:NP_002309.1 Gene:LOXL2 / 4017 HGNCID:6666 Length:774 Species:Homo sapiens
Sequence 2:NP_523806.2 Gene:Loxl2 / 37485 FlyBaseID:FBgn0034660 Length:511 Species:Drosophila melanogaster


Alignment Length:467 Identity:201/467 - (43%)
Similarity:272/467 - (58%) Gaps:37/467 - (7%)


- Green bases have known domain annotations that are detailed below.


Human   314 RFRKAYKPEQPLVRLRGGAYIGEGRVEVLKNGEWGTVCDDKWDLVSASVVCRELGFGSAKEAVTG 378
            |:.|....|:..:||.||....||.:|||.||:||.||||:||...|.:|||:|||...:.....
  Fly    49 RYTKVLNKEEGAIRLVGGDNEYEGNIEVLHNGKWGAVCDDEWDSTEADIVCRQLGFPGMRRYTRS 113

Human   379 SRLGQGIGPIHLNEIQCTGNEKSIIDCKFNAESQG-CNHEEDAGVRCNTPAMGL----------- 431
            ...|.......::.:.|.|:|:.::||.|....:. |...|.|||.|..|...|           
  Fly   114 GFFGPARRRFWMDNLFCEGHEQELVDCHFEGWGENDCEPGEAAGVVCYPPENALIPMATPIIRDE 178

Human   432 -----------QKKLRLNGGRNPYEGRVEVLVERNGSLVWGMVCGQNWGIVEAMVVCRQLGLGFA 485
                       :..:||.|||:..||||||.::...   ||.||...|.::||.|||||||||:|
  Fly   179 DLPKYPIHSRSRLYVRLRGGRSRIEGRVEVSLDGGR---WGSVCADGWSLLEANVVCRQLGLGYA 240

Human   486 SNAFQETWYWHGDVNSNKVVMSGVKCSGTELSLAHC-RHDGED--VACPQGGVQYGAGVACSETA 547
            |.|||..::  |..|.::.|:||.:|.|.|..||.| .||...  ::| .|..|:.|.|.|...|
  Fly   241 SEAFQTDFF--GGFNVSRPVLSGSECYGNETELADCLHHDASQGIISC-HGNRQHVAAVICDYIA 302

Human   548 PDLVLNAEMVQQTTYLEDRPMFMLQCAMEENCLSASAAQ---TDPTTGY--RRLLRFSSQIHNNG 607
            ||||::...::||.:||||||.::||||||||::..|.|   .||...|  ||||:|::...|.|
  Fly   303 PDLVVDYLEIEQTAHLEDRPMLLMQCAMEENCVANEAYQIQRDDPHWRYRSRRLLKFTAAAINAG 367

Human   608 QSDFRPKNGRHAWIWHDCHRHYHSMEVFTHYDLLNLNGTKVAEGHKASFCLEDTECEGDIQKNYE 672
            .:||||...:..|.||.||.|:||||||..:|:.||.|.|||:||||||||||:.|...:.|.|.
  Fly   368 NADFRPFKEKSQWEWHMCHMHFHSMEVFATFDIFNLRGIKVAQGHKASFCLEDSNCLPGVAKKYN 432

Human   673 CANFGDQGITMGCWDMYRHDIDCQWVDITDVPPGDYLFQVVINPNFEVAESDYSNNIMKCRSRYD 737
            |||:|||||::.|.|:|.:::||||||:||:.||.|:.::.|||.|:|||.:|.||...|...|.
  Fly   433 CANYGDQGISINCSDVYLYNLDCQWVDVTDLIPGTYVLKIAINPEFKVAEMNYDNNAAICDLIYT 497

Human   738 GHRIWMYNCHIG 749
            .:...:.||.:|
  Fly   498 ANFARVQNCQLG 509

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LOXL2NP_002309.1 SR 58..159 CDD:214555
SRCR 67..159 CDD:278931
SR 196..301 CDD:214555
SRCR 203..301 CDD:278931
SR 326..425 CDD:214555 38/99 (38%)
SRCR 331..425 CDD:278931 35/94 (37%)
SR 435..544 CDD:214555 50/111 (45%)
SRCR 440..544 CDD:278931 47/106 (44%)
Lysyl-oxidase like 548..751 105/207 (51%)
Lysyl_oxidase 548..743 CDD:279521 102/199 (51%)
Loxl2NP_523806.2 SR 61..161 CDD:214555 38/99 (38%)
SRCR 66..160 CDD:278931 35/93 (38%)
SR 193..298 CDD:214555 50/110 (45%)
SRCR 198..298 CDD:278931 47/105 (45%)
Lysyl_oxidase 303..503 CDD:279521 102/199 (51%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 228 1.000 Domainoid score I2492
eggNOG 1 0.900 - - E1_28KG1
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H1742
Inparanoid 1 1.050 388 1.000 Inparanoid score I2023
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D376277at33208
OrthoFinder 1 1.000 - - FOG0000389
OrthoInspector 1 1.000 - - otm41693
orthoMCL 1 0.900 - - OOG6_104333
Panther 1 1.100 - - O PTHR45817
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5813
SonicParanoid 1 1.000 - - X896
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1413.860

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