DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Usp32 and UBP9

DIOPT Version :9

Sequence 1:NP_001262074.2 Gene:Usp32 / 40169 FlyBaseID:FBgn0036913 Length:1779 Species:Drosophila melanogaster
Sequence 2:NP_192795.3 Gene:UBP9 / 826649 AraportID:AT4G10570 Length:923 Species:Arabidopsis thaliana


Alignment Length:1474 Identity:320/1474 - (21%)
Similarity:495/1474 - (33%) Gaps:609/1474 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   339 VSLTAEDFMLWTVQCDLRLMQPLLDLIFELCHIVFGLWPQCKHMENDIVRGWLRREERRPYRVGQ 403
            :::...||||....|||                     |.....|..|| ..|..|.....:.|.
plant     1 MTIPNSDFMLENGVCDL---------------------PFTPEEEKRIV-SELTSESEDNLKQGN 43

  Fly   404 FWYLITHDWWLSWMQYTQHTTHTCDYCKRTASQRTAVDEALVCDESFNTHSLEQHDSYSLGSGTG 468
            .:::|:..|:.||.:|.:::.:.|                                      .||
plant    44 LYFVISKRWYTSWQEYVENSANEC--------------------------------------STG 70

  Fly   469 SASGSGSASSGISAGRHCGPVRPGPIDNSNLITANPFRN---VRTLTGEGGHLKRDTPLVQNHDF 530
            .:|.:               .|||||||.::|.::...|   :|.|            ||:..|:
plant    71 ESSEA---------------PRPGPIDNHDIIESDSDINDPQLRRL------------LVEGEDY 108

  Fly   531 ELVPKSLWKALNRWYGDNLPLPRQVIQPP--NSDVELELYPLNLRILLHQAQPSQTGVGGGTQLG 593
            .||||.:||.|..||....|:.|::|...  .....:|:|||.| :|......|:|.:..|.|  
plant   109 VLVPKQVWKRLVEWYSGGPPIERKLICQGFYTRSYSVEVYPLCL-MLTDGRDESRTVIRLGKQ-- 170

  Fly   594 SWGSTVSGGYGVLASGGGYAAIAVSSVLQPPKRYLAYTAAFSRLATVRQVGEFLCEQLRLKSEDI 658
                                                        |::|::.|.:|....:..|..
plant   171 --------------------------------------------ASIRELYEKVCAMTGVPQEKA 191

  Fly   659 RLW-HVPQLDNGAI------LLEEDAMCLKELLIRDNDQLLLEIRNKDLTWPEELG--------S 708
            .:| :..:..||.:      .|||.::.:.:.::.:.|.|....::...:...||.        |
plant   192 HIWDYFDKRKNGLLDPLSYKSLEESSLHMDQDILVEVDGLSSSSQSAMSSTGNELALVPLEPSRS 256

  Fly   709 LATAQCG----QGAGTPG-----------DRRRLTRSSIMSVHAPGATGLHNLGNTCFMNAALQV 758
            :.|...|    .|..|..           |..|.:.|.:......|..||.|||||||||:|||.
plant   257 IVTIAGGPTLSNGHSTTSNFSLFPRITSEDDGRDSLSILGKGEKGGLAGLSNLGNTCFMNSALQC 321

  Fly   759 LFNTQPLAQYFQREMHRFEVNAANKLGTKGQLAMRYAELLKEVWTATTRSVAPLKLRFCVNKYAP 823
            |.:|.|:.:||.:: :..::|..|.||..|:||:.:.:|||::|::...:|||...:..:.::||
plant   322 LAHTPPIVEYFLQD-YSDDINRDNPLGMCGELAIAFGDLLKKLWSSGRNAVAPRAFKTKLARFAP 385

  Fly   824 QFAGGGQHDSQELLEWLLDALHEDLNRVMEKPYSELKDSNGRPDKIVAAEAWSQHHARNQSIIID 888
            ||:|..||||||||.:|||.||||||:|..|||.|||||:.|||..||.|.|:.|.|||.|:|:|
plant   386 QFSGYNQHDSQELLAFLLDGLHEDLNKVKRKPYIELKDSDSRPDDEVAEELWNYHKARNDSVIVD 450

  Fly   889 LFYGQLKSKVSCLGCGHESVRFDPFSLLSLPLPVENYIYFEVLVILLDGS-VPIKYGFRLNSDCK 952
            :..||.||.:.|..||..|:.||||..||:|||........:.|...||| :|:.|...:.....
plant   451 VCQGQYKSTLVCPVCGKISITFDPFMYLSVPLPSTLTRSMTITVFYCDGSRLPMPYTVIVPKQGS 515

  Fly   953 YSHLKHKLSTMCSLPPN-LMLVCELWNSQIRQVLNDDEKLRTQSAKELYVYQLPEQSMRTRSNSG 1016
            ...|...|.|.|.|..: .:|:.|:::.:|                 ...:::|           
plant   516 IRDLITALGTACCLAEDESLLLAEVYDHKI-----------------FRYFEIP----------- 552

  Fly  1017 LSMHIEQGLKDIQRSSALITSAQDSLSSLSTLQTSSHRASSRVLCNGHVSGLDVEGEAEVGTDVS 1081
                                     |.|||.::...|..:.|:                      
plant   553 -------------------------LDSLSAIKDDEHIVAYRL---------------------- 570

  Fly  1082 QCNSNSNYNPIVSTYSGNGSGDNQVHELLPDEAGKVSRCFGKRECMPHSLFCFKESLILSSSPEN 1146
                                  ||:.:             |.|:.....|...:|..:|.|    
plant   571 ----------------------NQIPK-------------GSRKAKLEILHGGQERAVLDS---- 596

  Fly  1147 TFMHGAAAQQKRVSSAKLLHTESNTSSMSYTNHSGENSMESSLTEPIPLADLEPVSSRNGSGGED 1211
                      .|.|..||.    .|..::|.|           |||:...|::.|.         
plant   597 ----------VRGSDVKLF----GTPFVTYVN-----------TEPLSGTDIDAVI--------- 627

  Fly  1212 CSYRTSPNDSSGLSTGHTLGASLDVDEQAEEGNAEDHDQPDQITTSQPETSSGVYSRRSSQPPHK 1276
                     |..||..|.:.|...:...::.|:..|      .|..|   :||:.|.        
plant   628 ---------SGFLSPLHKVHAPSKIHNGSDNGHLAD------ATVDQ---ASGILSS-------- 666

  Fly  1277 AGKYLVAVHRKITRHDSYFLSYHKTRPSLFGVPLLIPNSE--GGTHKDLYCAVWLQVSRLLSPLP 1339
                                                |::|  ..:.::|...::|...|.|:..|
plant   667 ------------------------------------PDTEIDNASDRELSFRIFLTDERGLNIKP 695

  Fly  1340 ATTEQANHAADCDDSLGYDFPFTLRAVKADGLTCAICPWSSFCRGCEIRCNNDYVLQGALPPINA 1404
            ..:|                                                             
plant   696 LQSE------------------------------------------------------------- 699

  Fly  1405 AASNTSTPKMNAKFPSLPNLEAKRTPEYTASLSYTPTTKYFEDFTIAIDWDPTALHLRYQST-LE 1468
                                         :|:|....|:      :.::|: ...|.||.|: |.
plant   700 -----------------------------SSISPGTVTR------VLVEWN-EGEHERYDSSYLS 728

  Fly  1469 RLWVDHETIAISRREQVEPVDLNHCLRAFTSEEKL---EQWYHCSHCKGKKPATKKLQIWKLPPI 1530
            .|...|:|...:::.:.|.:.|..||.||.:||.|   :.|: |..||..:.|.|||.:||||.|
plant   729 DLPEVHKTSFSAKKTRQESISLFSCLEAFLAEEPLGPDDMWF-CPSCKEHRQANKKLDLWKLPDI 792

  Fly  1531 LIVHLKRFNCVNGKWVKSQ--KVVHFPFDDFDPTPYLASVPQETILRHKELLELKNDAEMTMATN 1593
            |:.|||||  ...:::|::  ..|:||..|.|.:.|:                            
plant   793 LVFHLKRF--TYSRYLKNKIDTFVNFPVHDLDLSKYV---------------------------- 827

  Fly  1594 EVVSELDEIDAPSKEVKEELPNQTGSTKATASPPPTGNILRQSKTKNAVRRQRLISTSLTKTPIV 1658
                                                       |.||.                 
plant   828 -------------------------------------------KNKNG----------------- 832

  Fly  1659 DGEFEDYHQHRLKPDVDQFDPRYRLYAVVSHSGMLNGGHYISYASNA-TGSWYCYNDSSCREISQ 1722
                :.|              .|.||||.:|.|.|.||||.:||... ...||.::||....:::
plant   833 ----QSY--------------LYELYAVSNHYGGLGGGHYTAYAKLIDDNKWYHFDDSHVSSVNE 879

  Fly  1723 KPVIDPSAAYLLFYERKGLDYEPYLPNIEGRTLPNTASVPLEVD 1766
            ..:.: ||||:|||.|           :...|...||.:..::|
plant   880 SEIRN-SAAYVLFYRR-----------VRSETETQTAEMSTDMD 911

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp32NP_001262074.2 FRQ1 186..317 CDD:227455
UBP12 486..>1002 CDD:227847 169/552 (31%)
Peptidase_C19 <1480..1737 CDD:351799 63/262 (24%)
UBP9NP_192795.3 UBP12 17..894 CDD:227847 309/1428 (22%)
DUSP 38..137 CDD:197831 36/163 (22%)
Peptidase_C19 304..>480 CDD:271592 91/176 (52%)
USP7_C2 505..>566 CDD:291217 15/113 (13%)
Peptidase_C19R <740..893 CDD:239139 63/262 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 349 1.000 Domainoid score I222
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 359 1.000 Inparanoid score I591
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1283205at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm2807
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR21646
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.070

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