DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp32 and usp19

DIOPT Version :9

Sequence 1:NP_001262074.2 Gene:Usp32 / 40169 FlyBaseID:FBgn0036913 Length:1779 Species:Drosophila melanogaster
Sequence 2:XP_012816883.1 Gene:usp19 / 780341 XenbaseID:XB-GENE-5869969 Length:1478 Species:Xenopus tropicalis


Alignment Length:1134 Identity:268/1134 - (23%)
Similarity:396/1134 - (34%) Gaps:405/1134 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   727 LTRSSIMS----------VHAPGATGLHNLGNTCFMNAALQVLFNTQPLAQYFQREMHRFEVNAA 781
            :|.|::.|          |..||.|||.|||||||||:.:|.|.||:.|..|||......|:|..
 Frog   615 MTHSAVSSENVQEEEEKRVCPPGFTGLVNLGNTCFMNSVIQSLSNTRELRDYFQDRSFESEINCN 679

  Fly   782 NKLGTKGQLAMRYAELLKEVWTATTRSVAPLKLRFCVNKYAPQFAGGGQHDSQELLEWLLDALHE 846
            |.|||.|:||:.:|.||:.:|..|..:..|.||:..|...|.||.|..|||:||.:.:|||.|||
 Frog   680 NPLGTGGRLAVSFAVLLRALWKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHE 744

  Fly   847 DLNRVMEKPYSELKDSNGRPDKIVAAEAWSQHHARNQSIIIDLFYGQLKSKVSCLGCGHESVRFD 911
            ||||:..|||:|..||:||||:.||.|||.:|..||.|.::|||.||.|||:.|..|...|:.||
 Frog   745 DLNRIQNKPYTETVDSDGRPDEEVADEAWLRHKMRNDSFVVDLFQGQYKSKLVCPVCAKVSITFD 809

  Fly   912 PFSLLSLPLPVENYIYFEVLVILLDGSVPIKYGFRLNSDCKYSHLKHKLSTMCSLPPNLMLVCEL 976
            ||..|.:|||.:.    :||.:         |.|     .:..|.|         |...::....
 Frog   810 PFLYLPVPLPQKQ----KVLTV---------YYF-----AREPHKK---------PIKFLVSISK 847

  Fly   977 WNSQIRQVLNDDEKLRTQSAKELYVYQLPEQSMRTRS-NSGLSMHIEQGLKDIQRSSALI--TSA 1038
            .||...:||....|                 |:|.:: |..|:..::...:.|.|.|..:  .|.
 Frog   848 ENSSAAEVLESISK-----------------SVRVKAENLQLAEVVKNRFQRIFRPSCSLDSVSP 895

  Fly  1039 QDSLSSLSTLQTSSHRASSRVLCNGHVSGLDVEGEAEV-GTDVSQCNSNSNYNPIVSTYSGNGSG 1102
            .|.|.....|        |:.|....|....|:...:| ...:::|.:...              
 Frog   896 NDLLFCFEVL--------SKELSKERVVVFQVQQRPQVPSIPITKCAACQK-------------- 938

  Fly  1103 DNQVHELLPDEAGKVSRCFGKREC---------MPHSLFCFKESL---ILSSSPENTFMHGAAAQ 1155
             .|:.|  .::..:.:||:....|         ..|...|..|::   .|.|.||:...:...||
 Frog   939 -KQMSE--EEKLKRCTRCYRVGYCNQVCQKSHWPDHKTACRPENIGYPFLISVPESRLTYSRLAQ 1000

  Fly  1156 QKRVSSAKLLHTESNTSSMSYTNHS----------GENSMESSLTEPIPL----ADLEPVSS--- 1203
                    ||.        .|..:|          |..|.:.:   |.||    |||.|.|.   
 Frog  1001 --------LLE--------GYARYSVNVFQPPFIPGRTSPDHA---PQPLSSEKADLPPQSDLPL 1046

  Fly  1204 RNGSGGEDCSYRTSPNDSSGLSTGHTLGASLDVDEQAEEGNAEDHDQPDQITTSQPETSSGVYSR 1268
            ...|..|:..:.:..:..:.|.....|.||.|        :...|.:|.....|...|.|| :|.
 Frog  1047 LGESSEEEKDFHSVQSSQTTLPPLTCLSASGD--------SGIVHGKPPGDRVSLYSTDSG-FSE 1102

  Fly  1269 RSSQPPHK--AGKYLVAVHRKITRHDSYFLSYHKT-----RPSLFGVPLLIPNSEGGTHKDLYCA 1326
            .|:....:  :|.....::.|..:.::....:.::     ..|.|.:.::.||::....:|    
 Frog  1103 HSTDTVREMDSGGEKETIYEKSVKPEAAVAGFQQSESVNVHASAFYINVIDPNNKEMKLED---- 1163

  Fly  1327 VWLQVSRLLSPLPATTEQANHAADCDDSLGYDFPFTLRAVKADGLTCAICPWSS--------FCR 1383
                  :..|||..|       .||..:|                     .|.:        ...
 Frog  1164 ------KGESPLELT-------EDCSLAL---------------------VWKNNERAKEFVLVE 1194

  Fly  1384 GCEIRCNNDYVLQGALPPINAAASNTSTPKMNAKFPSLPNLEAKRTPEYTASLSYTPTTKYFEDF 1448
            ..|:.|..|        |.:|:                   ||.|...:|               
 Frog  1195 SKELECEED--------PGSAS-------------------EAARAGLFT--------------- 1217

  Fly  1449 TIAIDWDPTALHLRYQSTLERLWVDHETIAISRREQVEPVDLNHCLRAFTSEEKL---EQWYHCS 1510
                                                     |:.||..||..|.|   |.|| |.
 Frog  1218 -----------------------------------------LDQCLNLFTKPEVLAPEEAWY-CP 1240

  Fly  1511 HCKGKKPATKKLQIWKLPPILIVHLKRFNCVNGKW-VKSQKVVHFPFDDFDPTPYLASVPQETIL 1574
            .|...:.|:|:|.:|:||.|||:.||||:.....| .|...:|.||..:.|.:.:..        
 Frog  1241 KCNQHREASKQLMLWRLPNILIIQLKRFSFRTFIWRDKINDMVDFPVRNLDLSTFCI-------- 1297

  Fly  1575 RHKELLELKNDAEMTMATNEVVSELDEIDAPSKEVKEELPNQTGSTKATASPPPTGNILRQSKTK 1639
                                                                             
 Frog  1298 ----------------------------------------------------------------- 1297

  Fly  1640 NAVRRQRLISTSLTKTPIVDGEFEDYHQHRLKPDVDQFDPRYRLYAVVSHSGMLNGGHYISYA-- 1702
                                |:.|| ||.          |.|.||||::|.|.:.||||.:||  
 Frog  1298 --------------------GQKED-HQR----------PIYDLYAVINHYGGMIGGHYTAYARL 1331

  Fly  1703 ---SNATGS---WYCYNDSSCREISQKPVIDPSAAYLLFYERKGLDYE-PYLPNIEGRTLPNTAS 1760
               .|:..|   |..::||:...:.:..|: ...||:|||.|:....| |...:...|.:...||
 Frog  1332 PNEKNSQRSDVGWRLFDDSTVTTVDESQVV-TRYAYVLFYRRRNSPVERPMRGHPADRRVDAGAS 1395

  Fly  1761 VPL----------EVDETEGELKKLCSIS 1779
            ..:          :::..|.||.:...:|
 Frog  1396 ADVAGSQASLLWQQLEAEEDELHRRLDLS 1424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp32NP_001262074.2 FRQ1 186..317 CDD:227455
UBP12 486..>1002 CDD:227847 113/284 (40%)
Peptidase_C19 <1480..1737 CDD:351799 60/268 (22%)
usp19XP_012816883.1 p23_like 53..135 CDD:107220
p23_CS_SGT1_like 435..515 CDD:107223
USP19_linker 506..637 CDD:293210 4/21 (19%)
Peptidase_C19 629..>744 CDD:271592 54/114 (47%)
Peptidase_C19 640..>826 CDD:271592 95/189 (50%)
USP7_C2 810..>929 CDD:291217 34/170 (20%)
zf-MYND 933..975 CDD:280009 7/58 (12%)
Peptidase_C19R <1217..1371 CDD:239139 61/315 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1283205at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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