DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp32 and usp19

DIOPT Version :10

Sequence 1:NP_001262074.2 Gene:Usp32 / 40169 FlyBaseID:FBgn0036913 Length:1779 Species:Drosophila melanogaster
Sequence 2:XP_012816883.1 Gene:usp19 / 780341 XenbaseID:XB-GENE-5869969 Length:1478 Species:Xenopus tropicalis


Alignment Length:1134 Identity:268/1134 - (23%)
Similarity:396/1134 - (34%) Gaps:405/1134 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   727 LTRSSIMS----------VHAPGATGLHNLGNTCFMNAALQVLFNTQPLAQYFQREMHRFEVNAA 781
            :|.|::.|          |..||.|||.|||||||||:.:|.|.||:.|..|||......|:|..
 Frog   615 MTHSAVSSENVQEEEEKRVCPPGFTGLVNLGNTCFMNSVIQSLSNTRELRDYFQDRSFESEINCN 679

  Fly   782 NKLGTKGQLAMRYAELLKEVWTATTRSVAPLKLRFCVNKYAPQFAGGGQHDSQELLEWLLDALHE 846
            |.|||.|:||:.:|.||:.:|..|..:..|.||:..|...|.||.|..|||:||.:.:|||.|||
 Frog   680 NPLGTGGRLAVSFAVLLRALWKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHE 744

  Fly   847 DLNRVMEKPYSELKDSNGRPDKIVAAEAWSQHHARNQSIIIDLFYGQLKSKVSCLGCGHESVRFD 911
            ||||:..|||:|..||:||||:.||.|||.:|..||.|.::|||.||.|||:.|..|...|:.||
 Frog   745 DLNRIQNKPYTETVDSDGRPDEEVADEAWLRHKMRNDSFVVDLFQGQYKSKLVCPVCAKVSITFD 809

  Fly   912 PFSLLSLPLPVENYIYFEVLVILLDGSVPIKYGFRLNSDCKYSHLKHKLSTMCSLPPNLMLVCEL 976
            ||..|.:|||.:.    :||.:         |.|     .:..|.|         |...::....
 Frog   810 PFLYLPVPLPQKQ----KVLTV---------YYF-----AREPHKK---------PIKFLVSISK 847

  Fly   977 WNSQIRQVLNDDEKLRTQSAKELYVYQLPEQSMRTRS-NSGLSMHIEQGLKDIQRSSALI--TSA 1038
            .||...:||....|                 |:|.:: |..|:..::...:.|.|.|..:  .|.
 Frog   848 ENSSAAEVLESISK-----------------SVRVKAENLQLAEVVKNRFQRIFRPSCSLDSVSP 895

  Fly  1039 QDSLSSLSTLQTSSHRASSRVLCNGHVSGLDVEGEAEV-GTDVSQCNSNSNYNPIVSTYSGNGSG 1102
            .|.|.....|        |:.|....|....|:...:| ...:::|.:...              
 Frog   896 NDLLFCFEVL--------SKELSKERVVVFQVQQRPQVPSIPITKCAACQK-------------- 938

  Fly  1103 DNQVHELLPDEAGKVSRCFGKREC---------MPHSLFCFKESL---ILSSSPENTFMHGAAAQ 1155
             .|:.|  .::..:.:||:....|         ..|...|..|::   .|.|.||:...:...||
 Frog   939 -KQMSE--EEKLKRCTRCYRVGYCNQVCQKSHWPDHKTACRPENIGYPFLISVPESRLTYSRLAQ 1000

  Fly  1156 QKRVSSAKLLHTESNTSSMSYTNHS----------GENSMESSLTEPIPL----ADLEPVSS--- 1203
                    ||.        .|..:|          |..|.:.:   |.||    |||.|.|.   
 Frog  1001 --------LLE--------GYARYSVNVFQPPFIPGRTSPDHA---PQPLSSEKADLPPQSDLPL 1046

  Fly  1204 RNGSGGEDCSYRTSPNDSSGLSTGHTLGASLDVDEQAEEGNAEDHDQPDQITTSQPETSSGVYSR 1268
            ...|..|:..:.:..:..:.|.....|.||.|        :...|.:|.....|...|.|| :|.
 Frog  1047 LGESSEEEKDFHSVQSSQTTLPPLTCLSASGD--------SGIVHGKPPGDRVSLYSTDSG-FSE 1102

  Fly  1269 RSSQPPHK--AGKYLVAVHRKITRHDSYFLSYHKT-----RPSLFGVPLLIPNSEGGTHKDLYCA 1326
            .|:....:  :|.....::.|..:.::....:.::     ..|.|.:.::.||::....:|    
 Frog  1103 HSTDTVREMDSGGEKETIYEKSVKPEAAVAGFQQSESVNVHASAFYINVIDPNNKEMKLED---- 1163

  Fly  1327 VWLQVSRLLSPLPATTEQANHAADCDDSLGYDFPFTLRAVKADGLTCAICPWSS--------FCR 1383
                  :..|||..|       .||..:|                     .|.:        ...
 Frog  1164 ------KGESPLELT-------EDCSLAL---------------------VWKNNERAKEFVLVE 1194

  Fly  1384 GCEIRCNNDYVLQGALPPINAAASNTSTPKMNAKFPSLPNLEAKRTPEYTASLSYTPTTKYFEDF 1448
            ..|:.|..|        |.:|:                   ||.|...:|               
 Frog  1195 SKELECEED--------PGSAS-------------------EAARAGLFT--------------- 1217

  Fly  1449 TIAIDWDPTALHLRYQSTLERLWVDHETIAISRREQVEPVDLNHCLRAFTSEEKL---EQWYHCS 1510
                                                     |:.||..||..|.|   |.|| |.
 Frog  1218 -----------------------------------------LDQCLNLFTKPEVLAPEEAWY-CP 1240

  Fly  1511 HCKGKKPATKKLQIWKLPPILIVHLKRFNCVNGKW-VKSQKVVHFPFDDFDPTPYLASVPQETIL 1574
            .|...:.|:|:|.:|:||.|||:.||||:.....| .|...:|.||..:.|.:.:..        
 Frog  1241 KCNQHREASKQLMLWRLPNILIIQLKRFSFRTFIWRDKINDMVDFPVRNLDLSTFCI-------- 1297

  Fly  1575 RHKELLELKNDAEMTMATNEVVSELDEIDAPSKEVKEELPNQTGSTKATASPPPTGNILRQSKTK 1639
                                                                             
 Frog  1298 ----------------------------------------------------------------- 1297

  Fly  1640 NAVRRQRLISTSLTKTPIVDGEFEDYHQHRLKPDVDQFDPRYRLYAVVSHSGMLNGGHYISYA-- 1702
                                |:.|| ||.          |.|.||||::|.|.:.||||.:||  
 Frog  1298 --------------------GQKED-HQR----------PIYDLYAVINHYGGMIGGHYTAYARL 1331

  Fly  1703 ---SNATGS---WYCYNDSSCREISQKPVIDPSAAYLLFYERKGLDYE-PYLPNIEGRTLPNTAS 1760
               .|:..|   |..::||:...:.:..|: ...||:|||.|:....| |...:...|.:...||
 Frog  1332 PNEKNSQRSDVGWRLFDDSTVTTVDESQVV-TRYAYVLFYRRRNSPVERPMRGHPADRRVDAGAS 1395

  Fly  1761 VPL----------EVDETEGELKKLCSIS 1779
            ..:          :::..|.||.:...:|
 Frog  1396 ADVAGSQASLLWQQLEAEEDELHRRLDLS 1424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp32NP_001262074.2 EFh_PI-PLC 198..>251 CDD:333715
EF-hand motif 198..222 CDD:320029
EF-hand_7 227..290 CDD:463900
UBP12 486..>1002 CDD:227847 113/284 (40%)
Peptidase_C19 <1480..1737 CDD:470612 60/268 (22%)
usp19XP_012816883.1 p23_like 53..135 CDD:107220
p23_CS_SGT1_like 435..515 CDD:107223
USP19_linker 506..637 CDD:465191 4/21 (19%)
UBP12 <637..1374 CDD:227847 254/1060 (24%)
Blue background indicates that the domain is not in the aligned region.

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