DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Usp32 and Usp16

DIOPT Version :9

Sequence 1:NP_001262074.2 Gene:Usp32 / 40169 FlyBaseID:FBgn0036913 Length:1779 Species:Drosophila melanogaster
Sequence 2:NP_077220.2 Gene:Usp16 / 74112 MGIID:1921362 Length:825 Species:Mus musculus


Alignment Length:1170 Identity:212/1170 - (18%)
Similarity:311/1170 - (26%) Gaps:550/1170 - (47%)


- Green bases have known domain annotations that are detailed below.


  Fly   648 CEQLRL--------KSEDIRLWHVPQLDNGAILLEEDAMCLKELLIRDNDQLLLEIRNKDLTWPE 704
            |...||        |...:|.....:.:||.|.||             |.:|..|.:|:......
Mouse   125 CSSNRLGQVVDYVRKQAGVRTSKPAEKNNGHIELE-------------NKKLEKESKNEQEREKS 176

  Fly   705 ELGSLATAQCGQGAGTPGDRRRLTRSSIMSVHAPGAT--GLHNLGNTCFMNAALQVLFNTQPLAQ 767
            |                    .|.:.:|....|...|  ||.|||||||.||.:|.|..| |:.:
Mouse   177 E--------------------NLAKETIPMDSASQITVKGLSNLGNTCFFNAVMQNLSQT-PVLR 220

  Fly   768 YFQREM-----------------HRFEVNAANKLGTKGQLAMRYAELLKEVWTATTRSVAPLKLR 815
            ...:|:                 ...|||    |...|.|.:..::.|.|:.....|.|.|.:|.
Mouse   221 ELLKEVKMSGTIVKIEPPDLALTEPLEVN----LEPPGPLTLAMSQFLSEMQENKKRVVTPKELF 281

  Fly   816 FCVNKYAPQFAGGGQHDSQELLEWLLDALH-EDLNRVMEKPYSELKDSNGRPDKIVAAEAWSQHH 879
            ..|.|.|.:|.|..|.||||||.:|||.:. |:..||.:.......:|..:.|:.|..:......
Mouse   282 SQVCKKATRFKGYQQQDSQELLRYLLDGMRAEEHQRVSKGILKAFGNSTEKLDEEVKNKVKDYEK 346

  Fly   880 ARNQSIIID-LFYGQLKSKVSCLGCGHESVRFDPFSLLSLPLPVENYIYFEVLVILLDGSVPIKY 943
            .:.....:| :|.|:|.|.:.|..|...|:..:.|..||||             :|.|.|     
Mouse   347 KKAIPSFVDRIFGGELTSTIMCDECRTVSLVHESFLDLSLP-------------VLDDQS----- 393

  Fly   944 GFRLNSDCKYSHLKHKLSTMCSLPPNLMLVCELWNSQIRQVLNDDEKLRTQSAKELYVYQLPEQS 1008
            |.:..:|                            ..::..:.:::|...:...:.|        
Mouse   394 GKKSIND----------------------------KNVKMTMEEEDKDSEEEKDDSY-------- 422

  Fly  1009 MRTRSN--SGLSMHIEQGLKDIQRSSALITSAQDSLSSLSTLQTSSHRASSRVLCNGHVSGLDVE 1071
            |::||:  ||.|.|:::..|...:..|.....|..:.. ..|..:...|:.....|...:...:.
Mouse   423 MKSRSDLPSGTSKHLQKKAKKQAKKQAKNQRRQQKIQE-RFLHFNELCATDYTEDNEREADTALA 486

  Fly  1072 GEAEVGTDVSQCNSNSNYNPIVSTYSGNGSGDNQVHELLPDEAGKVSRCFGKRECMPHSLFCFKE 1136
            ||.||.||.:..:........:|....:..|...:.|..||                        
Mouse   487 GEVEVDTDSTHGSQEEATQIELSVNQKDLDGQESMIERTPD------------------------ 527

  Fly  1137 SLILSSSPENTFMHGAAAQQKRVSSAKLLHTESNTSSMSYTNHSGENSMESSLTEPIPLADLEPV 1201
               :..|||:.             ..|..:|||                :..:..|.|       
Mouse   528 ---VQESPEDL-------------GVKSANTES----------------DLGIVTPAP------- 553

  Fly  1202 SSRNGSGGEDCSYRTSPNDSSGLSTGHTLGASLDVDEQAEEGNAEDHDQPDQITTSQPETSSGVY 1266
                     :|     |.|.:|..........||:....:..|......||:|.           
Mouse   554 ---------EC-----PRDFNGAFLEERTSGELDIINGLKNLNLNAAVDPDEIN----------- 593

  Fly  1267 SRRSSQPPHKAGKYLVAVHRKITRHDSYFLSYHKTRPSLFGVPLLIPNSEGGTHKDLYCAVWLQV 1331
                                                       :.|||.                
Mouse   594 -------------------------------------------IEIPND---------------- 599

  Fly  1332 SRLLSPLPATTEQANHAADCDDSLGYDFPFTLRAVKADGLTCAICPWSSFCRGCEIRCNNDYVLQ 1396
                          :|:|          |.....:..|       |.::||              
Mouse   600 --------------SHSA----------PKVYEVMNED-------PETAFC-------------- 619

  Fly  1397 GALPPINAAASNTSTPKMNAKFPSLPNLEAKRTPEYTASLSYTPTTKYFEDFTIAIDWDPTALHL 1461
                                   :|.|.||..|.|                              
Mouse   620 -----------------------TLANREAFSTDE------------------------------ 631

  Fly  1462 RYQSTLERLWVDHETIAISRREQVEPVDLNHCLRAFTSEEKLEQWYH-----CS--HCKGKKP-- 1517
                                      ..:.|||..||..|||:....     ||  .|.|.|.  
Mouse   632 --------------------------CSIQHCLYQFTRNEKLQDANKLLCEVCSRRQCNGPKANI 670

  Fly  1518 ----------ATKKLQIWKLPPILIVHLKRFNCVNGKWVKSQKVVHFPFDDFDPTPYLASVPQET 1572
                      |.|::.:...||:|.:|||||........|..|.:.||                 
Mouse   671 KGDRRHVYTNAKKQMLVSLAPPVLTLHLKRFQQAGFNLRKVNKHIKFP----------------- 718

  Fly  1573 ILRHKELLELKNDAEMTMATNEVVSELDEIDAP-----SKEVKEELPNQTGSTKATASPPPTGNI 1632
                 |:|:|                     ||     .|.|.||      ||:..         
Mouse   719 -----EILDL---------------------APFCTLKCKNVAEE------STRVL--------- 742

  Fly  1633 LRQSKTKNAVRRQRLISTSLTKTPIVDGEFEDYHQHRLKPDVDQFDPRYRLYAVVSHSGMLNGGH 1697
                                                            |.||.||.|||.:..||
Mouse   743 ------------------------------------------------YSLYGVVEHSGTMRSGH 759

  Fly  1698 YISYASNAT------------------------GSWYCYNDSSCREISQKPVIDPSAAYLLFYER 1738
            |.:||...|                        |.|:..:|:..:.:....|:: |.||||||||
Mouse   760 YTAYAKERTASCHLSNLVLHGDIPQDCEMESTKGQWFHISDTHVQAVPITKVLN-SQAYLLFYER 823

  Fly  1739  1738
            Mouse   824  823

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp32NP_001262074.2 FRQ1 186..317 CDD:227455
UBP12 486..>1002 CDD:227847 88/382 (23%)
Peptidase_C19 <1480..1737 CDD:351799 62/304 (20%)
Usp16NP_077220.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..20
zf-UBP 48..122 CDD:366940
UBP12 <135..823 CDD:227847 207/1158 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 164..184 4/39 (10%)
Peptidase_C19K 196..>401 CDD:239132 67/255 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 393..456 14/103 (14%)
Peptidase_C19K <624..822 CDD:239132 66/360 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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