DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp32 and usp45

DIOPT Version :9

Sequence 1:NP_001262074.2 Gene:Usp32 / 40169 FlyBaseID:FBgn0036913 Length:1779 Species:Drosophila melanogaster
Sequence 2:XP_005158432.1 Gene:usp45 / 564004 ZFINID:ZDB-GENE-100211-2 Length:803 Species:Danio rerio


Alignment Length:1140 Identity:207/1140 - (18%)
Similarity:316/1140 - (27%) Gaps:549/1140 - (48%)


- Green bases have known domain annotations that are detailed below.


  Fly   679 CLKELLIRDNDQLLLEIRNKDLTWPEELGSLATAQCGQGAGTPGDRRRLT------------RSS 731
            |.:||....|.:.|.:    .|.:.::..:.||      :||.....:|.            :|.
Zfish   129 CKEELSTHCNKKALAQ----TLDFLQKQSAKAT------SGTSSKLIKLREEPAEYVDTQRGKSP 183

  Fly   732 IMSVHAPGATGLHNLGNTCFMNAALQVLFNT---QPLAQYFQREMHRFEVNAANKLGTKGQLAMR 793
            :.|...| ..|::|||||||.||.:|.|..|   ..|.|..:.:.|:.:::.:.:... |.|.:.
Zfish   184 VNSTLIP-VKGINNLGNTCFFNAVMQNLSQTHMLNDLIQDVKEKGHKMKISPSTETNL-GSLTVT 246

  Fly   794 -------------YAELLKEVWTATTRSVAPLKLRFCVNKY---APQFAGGGQHDSQELLEWLLD 842
                         :.:.:||      ....|:..:...|:.   ||:|.|..|.||||||.:|||
Zfish   247 LPSPEPLTSAMFLFLQSMKE------SGKGPVSPKILFNQLCQKAPRFKGYQQQDSQELLHYLLD 305

  Fly   843 ALH-EDLNRVMEKPYSELKDSNGRPDKIVAAEAWSQHHARNQ-----SIIIDLFYGQLKSKVSCL 901
            ::. |:..|:..   ..||..|...:|....|...|..|..:     :.:..:|.|:|.|.:.|.
Zfish   306 SMRVEETKRIKA---GILKAFNNPTEKTADEETKRQVKAYGKEGVKLNFVDRIFVGELTSTIMCE 367

  Fly   902 GCGHESVRFDPFSLLSLPLPVENYIYFEVLVILLDGSVPIKYGFRLNSDCKYSHLKHKLSTMCSL 966
            .|.|.|...:.|..:|||: :|..|                                      |.
Zfish   368 ECEHISTVKEAFIDISLPI-IEERI--------------------------------------SK 393

  Fly   967 PPNLMLVCELWNSQIRQVLNDDEKLRTQSAKELYVYQLPEQSMRTRSNSGLSMHIEQGLKDIQRS 1031
            |.|                                   |.:    ...||             |.
Zfish   394 PTN-----------------------------------PAR----LGKSG-------------RE 406

  Fly  1032 SALITSAQDSLSSLSTLQTSSHRASSRVLCNGHVSGLDVEGEAEVGTDVSQCNSNSNYNPIVSTY 1096
            ...:||..|||::                   |                ||.|.||         
Zfish   407 QDSLTSHDDSLAA-------------------H----------------SQANRNS--------- 427

  Fly  1097 SGNGSGDNQVHELLPDEAGKVSRCFGKRECMPHSLFCFKESLILSSSPENTFMHGAAAQQKRVSS 1161
                                                                        :|:|.
Zfish   428 ------------------------------------------------------------RRLSG 432

  Fly  1162 AKLLHTESNTSSMSYTNHSGENSMESSLTEPIPLADLEPVSSRNGSGGEDCSYRTSPNDSSGLST 1226
            .||....|:||.    :..|.:::.|...|.:.:|         |.|..  ||||.         
Zfish   433 QKLQSRHSSTSH----DDRGPDTVSSRQEEDLCVA---------GRGLS--SYRTD--------- 473

  Fly  1227 GHTLGASLDVDEQAEEGNAEDHDQPDQITTSQPETSSGVYSRRSSQPPHKAGKYLVAVHRKITRH 1291
              |:|:..|..|  :|.|.:|.........|:.|.|..:.|  .|.....:.|..:......|.|
Zfish   474 --TMGSQSDCSE--KESNLQDSSNDADSEASESEWSPRIPS--VSSHSSTSDKTSITTTLSTTTH 532

  Fly  1292 DSYFLSYHKTRPSLFGVPLLIPNSEGGTHKDLYCAV----WLQVSRLLSPLPATTEQANHAADCD 1352
            :...    |:.||...:|.:.| .:||..:.|..||    .:..|....|:..:.|:.:...|.|
Zfish   533 NPSL----KSNPSSTPLPSIRP-QQGGAVEQLVSAVSKLGLVHTSTDTLPISHSQEELSETRDRD 592

  Fly  1353 DSLGYDFPFTLRAVKADGLTCAICPWSSFCRGCEIRCNNDYVLQGALPPINAAASNTSTPKMNAK 1417
                                               |.::    |||                   
Zfish   593 -----------------------------------RQHH----QGA------------------- 599

  Fly  1418 FPSLPNLEAKRTPEYTASLSYTPTTKYFEDFTIAIDWDPTALHLRYQSTLERLWVDHETIAISRR 1482
            |..|.:             ||||::|                                       
Zfish   600 FQVLCH-------------SYTPSSK--------------------------------------- 612

  Fly  1483 EQVEPVDLNHCLRAFTSEEKL--EQWYHCSHCKGKK----------------PATKKLQIWKLPP 1529
                ...:..||..|||.|.|  .....|.:|..::                .|.|::.|..|||
Zfish   613 ----ECSVQSCLHQFTSIELLMGNNKLLCENCTDRRQRQMKRSDKKAEKVYTSARKQMLISALPP 673

  Fly  1530 ILIVHLKRFNCVNGKWVKSQKVVHFPFDDFDPTPYLASVPQETILRHKELLELKNDAEMTMATNE 1594
            ::.:|||||:.......|..:.|.||.                      ||:|   |....||  
Zfish   674 VVTLHLKRFHQAGMNLRKVNRHVDFPL----------------------LLDL---APFCSAT-- 711

  Fly  1595 VVSELDEIDAPSKEVKEELPNQTGSTKATASPPPTGNILRQSKTKNAVRRQRLISTSLTKTPIVD 1659
                                                       .||....:|::           
Zfish   712 -------------------------------------------CKNLGSGERVL----------- 722

  Fly  1660 GEFEDYHQHRLKPDVDQFDPRYRLYAVVSHSGMLNGGHYISYASNAT------------------ 1706
                                 |.||.:|.|||.:.||||.:|....|                  
Zfish   723 ---------------------YSLYGIVEHSGSMRGGHYAAYVKVRTPQRKPEQRRNQSGSREAC 766

  Fly  1707 ----GSWYCYNDSSCREISQKPVIDPSAAYLLFYE 1737
                |.|...:|::.:.:.:..|:: |.|||||||
Zfish   767 SAPQGQWVYVSDTTVQTVPESRVLN-SQAYLLFYE 800

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp32NP_001262074.2 FRQ1 186..317 CDD:227455
UBP12 486..>1002 CDD:227847 76/359 (21%)
Peptidase_C19 <1480..1737 CDD:351799 56/296 (19%)
usp45XP_005158432.1 UBP14 16..>329 CDD:227532 55/220 (25%)
UBP12 <193..800 CDD:227847 191/1063 (18%)
Peptidase_C19 193..>389 CDD:351799 57/206 (28%)
Peptidase_C19K <606..800 CDD:239132 61/339 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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