DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp32 and usp43a

DIOPT Version :9

Sequence 1:NP_001262074.2 Gene:Usp32 / 40169 FlyBaseID:FBgn0036913 Length:1779 Species:Drosophila melanogaster
Sequence 2:XP_009300631.1 Gene:usp43a / 563983 ZFINID:ZDB-GENE-100211-1 Length:1154 Species:Danio rerio


Alignment Length:1071 Identity:217/1071 - (20%)
Similarity:335/1071 - (31%) Gaps:435/1071 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   738 PGATGLHNLGNTCFMNAALQVLFNTQPLAQYFQREMHRFEVNAANKLG------TKGQLAMRYAE 796
            ||..||.|.||||||||.:|.|.||:.||:|...|.:::|:|.....|      .:|::..:.|.
Zfish   111 PGVQGLKNHGNTCFMNAVVQCLSNTELLAEYLGLEQYKYELNERRINGMMKSEEVRGEVTDKLAS 175

  Fly   797 LLKEVWTATTRSVAPLKLRFCVNKYAPQFAGGGQHDSQELLEWLLDALHED----LNRVMEKPYS 857
            |::.:||........:..:..|.||..||.|..|||:.|.|.||||.:|||    .|....:..|
Zfish   176 LVRALWTNDYTPQLSVDFKSVVAKYGSQFKGNAQHDALEFLLWLLDCVHEDANLSTNNNQSRNSS 240

  Fly   858 ELKDSNGRPDKIVAAEAWSQHHARNQSIIIDLFYGQLKSKVSCLGCGHESVRFDPFSLLSLPLPV 922
            ..|.|.|..:......|.||......|.:.:.|..|.:|.::|..|..:|..||||..:|||:|:
Zfish   241 SSKGSVGLEESSCPGPANSQQPGTRHSFVQEHFQAQYRSSLTCPHCLKQSNTFDPFLCISLPIPL 305

  Fly   923 ENYIYFEV-LVILLDGSVPIKYGFRLNSDCKYSHLKHKLSTMCSLPPNLMLVCELWNSQIRQVLN 986
            .......| ||...:|...::.|..:......|.|:..::....|.|:.:::.|:.:...::..:
Zfish   306 RQTRALNVTLVFSTEGQRFLRIGLAVPLFGSISTLRAMVAEEGKLSPDQVILTEMNSGGFQRSFS 370

  Fly   987 DDEKLRTQSAKE-LYVYQLPEQSMRTRSNSGLSMHIEQGLKDIQRSSALITSAQDSLSSLSTLQT 1050
            |::.:.:.|..: :|.:|:|.             |..:|      .|...:....||.|      
Zfish   371 DEDDMTSISESDVIYAFQVPP-------------HFTRG------GSMRFSGYHHSLPS------ 410

  Fly  1051 SSHRASSRVLCNGHVSGLDVEGEAEVGTDVSQCNSNSNYNPIVSTYSGNGSGDNQVHELLPDEAG 1115
                                                   :|..:.:.|        |.|.|    
Zfish   411 ---------------------------------------SPYTADFKG--------HRLPP---- 424

  Fly  1116 KVSRCFGKRECMPHSLFCFKESLILSSSPENTFMHGAAAQQKRVSSAKLLHTESNTSSMSYTNHS 1180
                                                                 |.|.|..:.||.
Zfish   425 -----------------------------------------------------SGTLSTEFLNHG 436

  Fly  1181 GENSMESSLTEPIPLADLEPVSSRNGSGGEDCSYRTSPNDSSGLSTGHTLGASLDVDEQAEEGNA 1245
            |.:.:            |..:.:..|||                                     
Zfish   437 GSSKV------------LLLICNVAGSG------------------------------------- 452

  Fly  1246 EDHDQPDQITTSQPETSSGVYSRRSSQPPHKAGKYLVAVHRKITRHDSYFLSYHKTRPS------ 1304
                        |..|..|        ||     :|:.|.|.        ||:...:.|      
Zfish   453 ------------QQATRFG--------PP-----FLMRVERT--------LSWDHLQQSVCNKLY 484

  Fly  1305 LFGVPLLIPNSE-------GGTHKDLYCAVWLQVSRLLSPLPATTEQANHAADCDDSLGYDFPFT 1362
            :|....:|..:|       ||:....|          |||              .||.....|..
Zfish   485 VFQKTAIIKTTELFKVRVVGGSASCSY----------LSP--------------HDSRPLCHPTV 525

  Fly  1363 LRAVKADGLTCAICPWSSFCRGCEIRCNNDYVLQGALPPINAAASNTSTPKMNAKFPSLPNLEAK 1427
            .||:|..|                                                |..| |..|
Zfish   526 DRALKLCG------------------------------------------------PGGP-LHVK 541

  Fly  1428 RTPEYTASLSYTPTTKYFEDFTIAIDWDPTALHLRYQSTLERLWVDHETIAISRREQVE--PVDL 1490
                                  :.|:||.......:.:..|.:..|.|::.|.::..|:  ...|
Zfish   542 ----------------------LIIEWDNKIKECLFGNIQEEVIEDAESVRIQQQNHVQQHSCTL 584

  Fly  1491 NHCLRAFTSEEKL---EQWYHCSHCKGKKPATKKLQIWKLPPILIVHLKRFNCVNGKWVKSQKVV 1552
            :.|.:.:|.||:|   :.| .|.|||..:....|:.:|.||.|||:|||||..|..:..|...::
Zfish   585 DDCFQLYTKEEQLAPDDAW-KCPHCKQMQQGMVKMSLWTLPDILILHLKRFRQVGKRRNKLSTLI 648

  Fly  1553 HFPFDDFDPTPYLASVPQETILRHKELLELKNDAEMTMATNEVVSELDEIDAPSKEVKEELPNQT 1617
            .||....|.||::.          |....:||.|                               
Zfish   649 RFPVSALDMTPHVV----------KRSQSMKNLA------------------------------- 672

  Fly  1618 GSTKATASPPPTGNILRQSKTKNAVRRQRLISTSLTKTPIVDGEFEDYHQHRLKPDVDQFDPRYR 1682
                      |..:..:..:|                                       |..|.
Zfish   673 ----------PLPSTWKHGET---------------------------------------DFLYD 688

  Fly  1683 LYAVVSHSGMLNGGHYISYASNAT-GSWYCYNDSSCREISQKPVIDPSAAYLLFYERKGLDYEPY 1746
            ||||.:|.|.::||||.:|..|:. |.||.|:|||. ||..:..:....||:|||:|:.: ..|:
Zfish   689 LYAVCNHHGGMHGGHYTAYCRNSVDGHWYSYDDSSV-EIVPEEELCTRGAYILFYQRRNV-IPPW 751

  Fly  1747 LPN--IEGRTLPNTAS---VPLEVDETEGEL 1772
            ..|  :.|.|..:.:.   :.|..|...|.:
Zfish   752 SANSSVRGSTSSSMSDHWLIRLNGDSKRGSM 782

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp32NP_001262074.2 FRQ1 186..317 CDD:227455
UBP12 486..>1002 CDD:227847 83/275 (30%)
Peptidase_C19 <1480..1737 CDD:351799 64/262 (24%)
usp43aXP_009300631.1 UBP12 <76..746 CDD:227847 210/1032 (20%)
Peptidase_C19 115..>315 CDD:271592 69/199 (35%)
Peptidase_C19 115..>221 CDD:271592 40/105 (38%)
Peptidase_C19R <578..743 CDD:239139 63/256 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1283205at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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