DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp32 and usp43a

DIOPT Version :10

Sequence 1:NP_001262074.2 Gene:Usp32 / 40169 FlyBaseID:FBgn0036913 Length:1779 Species:Drosophila melanogaster
Sequence 2:NP_001428971.1 Gene:usp43a / 563983 ZFINID:ZDB-GENE-100211-1 Length:1155 Species:Danio rerio


Alignment Length:1092 Identity:221/1092 - (20%)
Similarity:339/1092 - (31%) Gaps:451/1092 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   717 GAGTPGDRRRLTRSSIMSVHAPGATGLHNLGNTCFMNAALQVLFNTQPLAQYFQREMHRFEVNAA 781
            |..|||            ||    .||.|.||||||||.:|.|.||:.||:|...|.:::|:|..
Zfish   107 GEKTPG------------VH----EGLKNHGNTCFMNAVVQCLSNTELLAEYLGLEQYKYELNER 155

  Fly   782 NKLG------TKGQLAMRYAELLKEVWTATTRSVAPLKLRFCVNKYAPQFAGGGQHDSQELLEWL 840
            ...|      .:|::..:.|.|::.:||........:..:..|.||..||.|..|||:.|.|.||
Zfish   156 RINGMMKSEEVRGEVTDKLASLVRALWTNDYTPQLSVDFKSVVAKYGSQFKGNAQHDALEFLLWL 220

  Fly   841 LDALHED----LNRVMEKPYSELKDSNGRPDKIVAAEAWSQHHARNQSIIIDLFYGQLKSKVSCL 901
            ||.:|||    .|....:..|..|.|.|..:......|.||......|.:.:.|..|.:|.::|.
Zfish   221 LDCVHEDANLSTNNNQSRNSSSSKGSVGLEESSCPGPANSQQPGTRHSFVQEHFQAQYRSSLTCP 285

  Fly   902 GCGHESVRFDPFSLLSLPLPVENYIYFEV-LVILLDGSVPIKYGFRLNSDCKYSHLKHKLSTMCS 965
            .|..:|..||||..:|||:|:.......| ||...:|...::.|..:......|.|:..::....
Zfish   286 HCLKQSNTFDPFLCISLPIPLRQTRALNVTLVFSTEGQRFLRIGLAVPLFGSISTLRAMVAEEGK 350

  Fly   966 LPPNLMLVCELWNSQIRQVLNDDEKLRTQSAKE-LYVYQLPEQSMRTRSNSGLSMHIEQGLKDIQ 1029
            |.|:.:::.|:.:...::..:|::.:.:.|..: :|.:|:|.             |..:|     
Zfish   351 LSPDQVILTEMNSGGFQRSFSDEDDMTSISESDVIYAFQVPP-------------HFTRG----- 397

  Fly  1030 RSSALITSAQDSLSSLSTLQTSSHRASSRVLCNGHVSGLDVEGEAEVGTDVSQCNSNSNYNPIVS 1094
             .|...:....||.|                                             :|..:
Zfish   398 -GSMRFSGYHHSLPS---------------------------------------------SPYTA 416

  Fly  1095 TYSGNGSGDNQVHELLPDEAGKVSRCFGKRECMPHSLFCFKESLILSSSPENTFMHGAAAQQKRV 1159
            .:.|        |.|.|                                                
Zfish   417 DFKG--------HRLPP------------------------------------------------ 425

  Fly  1160 SSAKLLHTESNTSSMSYTNHSGENSMESSLTEPIPLADLEPVSSRNGSGGEDCSYRTSPNDSSGL 1224
                     |.|.|..:.||.|.:.:            |..:.:..|||                
Zfish   426 ---------SGTLSTEFLNHGGSSKV------------LLLICNVAGSG---------------- 453

  Fly  1225 STGHTLGASLDVDEQAEEGNAEDHDQPDQITTSQPETSSGVYSRRSSQPPHKAGKYLVAVHRKIT 1289
                                             |..|..|        ||     :|:.|.|.  
Zfish   454 ---------------------------------QQATRFG--------PP-----FLMRVERT-- 470

  Fly  1290 RHDSYFLSYHKTRPS------LFGVPLLIPNSE-------GGTHKDLYCAVWLQVSRLLSPLPAT 1341
                  ||:...:.|      :|....:|..:|       ||:....|          |||    
Zfish   471 ------LSWDHLQQSVCNKLYVFQKTAIIKTTELFKVRVVGGSASCSY----------LSP---- 515

  Fly  1342 TEQANHAADCDDSLGYDFPFTLRAVKADGLTCAICPWSSFCRGCEIRCNNDYVLQGALPPINAAA 1406
                      .||.....|...||:|..|                                    
Zfish   516 ----------HDSRPLCHPTVDRALKLCG------------------------------------ 534

  Fly  1407 SNTSTPKMNAKFPSLPNLEAKRTPEYTASLSYTPTTKYFEDFTIAIDWDPTALHLRYQSTLERLW 1471
                        |..| |..|                      :.|:||.......:.:..|.:.
Zfish   535 ------------PGGP-LHVK----------------------LIIEWDNKIKECLFGNIQEEVI 564

  Fly  1472 VDHETIAISRREQVE--PVDLNHCLRAFTSEEKL---EQWYHCSHCKGKKPATKKLQIWKLPPIL 1531
            .|.|::.|.::..|:  ...|:.|.:.:|.||:|   :.| .|.|||..:....|:.:|.||.||
Zfish   565 EDAESVRIQQQNHVQQHSCTLDDCFQLYTKEEQLAPDDAW-KCPHCKQMQQGMVKMSLWTLPDIL 628

  Fly  1532 IVHLKRFNCVNGKWVKSQKVVHFPFDDFDPTPYLASVPQETILRHKELLELKNDAEMTMATNEVV 1596
            |:|||||..|..:..|...::.||....|.||::.          |....:||.|          
Zfish   629 ILHLKRFRQVGKRRNKLSTLIRFPVSALDMTPHVV----------KRSQSMKNLA---------- 673

  Fly  1597 SELDEIDAPSKEVKEELPNQTGSTKATASPPPTGNILRQSKTKNAVRRQRLISTSLTKTPIVDGE 1661
                                           |..:..:..:|                       
Zfish   674 -------------------------------PLPSTWKHGET----------------------- 684

  Fly  1662 FEDYHQHRLKPDVDQFDPRYRLYAVVSHSGMLNGGHYISYASNAT-GSWYCYNDSSCREISQKPV 1725
                            |..|.||||.:|.|.::||||.:|..|:. |.||.|:|||. ||..:..
Zfish   685 ----------------DFLYDLYAVCNHHGGMHGGHYTAYCRNSVDGHWYSYDDSSV-EIVPEEE 732

  Fly  1726 IDPSAAYLLFYERKGLDYEPYLPN--IEGRTLPNTAS---VPLEVDETEGEL 1772
            :....||:|||:|:.: ..|:..|  :.|.|..:.:.   :.|..|...|.:
Zfish   733 LCTRGAYILFYQRRNV-IPPWSANSSVRGSTSSSMSDHWLIRLNGDSKRGSM 783

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp32NP_001262074.2 EFh_PI-PLC 198..>251 CDD:333715
EF-hand motif 198..222 CDD:320029
EF-hand_7 227..290 CDD:463900
UBP12 486..>1002 CDD:227847 87/296 (29%)
Peptidase_C19 <1480..1737 CDD:470612 64/262 (24%)
usp43aNP_001428971.1 None
Blue background indicates that the domain is not in the aligned region.

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