DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Usp32 and usp32

DIOPT Version :9

Sequence 1:NP_001262074.2 Gene:Usp32 / 40169 FlyBaseID:FBgn0036913 Length:1779 Species:Drosophila melanogaster
Sequence 2:XP_686236.6 Gene:usp32 / 557981 ZFINID:ZDB-GENE-100210-5 Length:1585 Species:Danio rerio


Alignment Length:1922 Identity:689/1922 - (35%)
Similarity:975/1922 - (50%) Gaps:486/1922 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGTKESKHSNSVSYEDSVKRVSDVELRRLRDAFKKSAGVGRNFLSRNAFQQDVLCEGVPPKIVDM 65
            ||.|||: ...:||:::||||:||||:|||||||:::|:. .::::..|.::||.:|||||:.::
Zfish     1 MGAKESR-IGFLSYDEAVKRVTDVELKRLRDAFKRTSGLS-VYMTQQCFFREVLGDGVPPKVAEV 63

  Fly    66 LYAACGGTQRGISFNDLLCGLVLITRGTQAEKTKFLWNLYCNDAGTFIIKSD---YVRNVN-LAP 126
            :|.:.|||.:|:.||.|:.||||:|||...||.|::::|:.:|:|||:::.|   .:|:|: ..|
Zfish    64 IYNSFGGTSKGLHFNYLIVGLVLLTRGRDEEKAKYIFSLFASDSGTFVVREDVENMLRSVDGEVP 128

  Fly   127 FESVSLFAQSERVNFEQFQDWIIKHRNATVLSKWLLSDN-CVSLTSELETPTFYQSLAGVTHLEE 190
            ......|.:.|:||:|:|:.|::::::|...|:||||.. ||:||.:.:||||||:|||||||||
Zfish   129 PSLRKCFTEGEKVNYEKFKSWLLQNKDAFTFSRWLLSGGVCVTLTDDSDTPTFYQTLAGVTHLEE 193

  Fly   191 KDIGDLEKEFWRLKNTSQNGQIDLQFLGPLISPPIPKNALAGLFNAFDENRDGHIDFKELCCGVS 255
            .||.||||.:|.||..|:.|:.||:...||:||||..:...|||:|||||||.||||||:.||:|
Zfish   194 SDIIDLEKRYWLLKAQSRTGRFDLETFVPLVSPPIHASLSEGLFHAFDENRDNHIDFKEISCGLS 258

  Fly   256 AACRGPGVERTRFCFKIFDVDRDGVLSHDETLQMINVLLLVAKENQ-ESQQYKDLTKQLVISDLL 319
            |.||||..||.:||||:||||||||||.||..:|:..||.|.|:|: ::....|.:...::.|:|
Zfish   259 ACCRGPVAERQKFCFKVFDVDRDGVLSRDEIHEMVVALLEVWKDNRTDTLPEFDSSVSEIVEDIL 323

  Fly   320 EFGQRRSPDGTPSKLTRDNVSLTAEDFMLWTVQCDLRLMQPLLDLIFELCHIVFGLWPQCKHMEN 384
            :...           |.....||.||:.:|:|:.  .|....|:|:|::||||.||.|.....|.
Zfish   324 KMHD-----------TTKQGHLTLEDYQIWSVKS--ALANEFLNLLFQVCHIVLGLRPATPEEEG 375

  Fly   385 DIVRGWLRREERRPYRVGQFWYLITHDWWLSWMQYTQHTTH-------TCDYCKRTASQRTAVDE 442
            .|:||||.||.|...:..|.|:||:..||..|..|.::...       :.......:||..|..|
Zfish   376 QIIRGWLERESRHGLQPSQNWFLISMQWWQQWKDYVRYDNKSIVMEQPSVQGSGMRSSQSAASVE 440

  Fly   443 ALV------------CDESFNTHSLEQHDSYSLGSGTGSASG-------SGSASSGISAGRH--- 485
            .::            .:|.|       .|:.|..|....::|       |.||:....|.:|   
Zfish   441 PILNRIGLVVRSPSSPEEKF-------PDNISSSSEASESTGNSLTPHISSSATDVCFARQHNIS 498

  Fly   486 -----C------------GPVRPGPIDNSNLITANPFRNVRTLTGEGGHLKRDTPLVQNHDFELV 533
                 |            ...|||.|||..|:|..|.: ..|||.|||.||:...|:...:||.|
Zfish   499 DNNNQCFSSANGHLPNSLAVQRPGAIDNQPLVTTEPMK-APTLTMEGGRLKKSHQLLSGREFETV 562

  Fly   534 PKSLWKALNRWYGDNLPLPRQVIQPP-NSDVELELYPLNLRILLHQAQPSQTGVGGGTQLGSWGS 597
            |:.:|:||..|||.||.|||.||:.. .:..||||:||.|..|  :.||:..    ..|...|  
Zfish   563 PEPVWRALYHWYGANLSLPRPVIKSTVKAQPELELFPLYLLFL--RQQPATR----SPQSNIW-- 619

  Fly   598 TVSGGYGVLASGGGYAAIAVSSVLQPPKRYLAYTAAFSRLATVRQVGEFLCEQLRLKSEDIRLWH 662
             |:.|             .|.|...|.||.||||..|||:.|::.:.|:|.::||:|.||:||| 
Zfish   620 -VNMG-------------NVPSPNAPLKRVLAYTGCFSRMCTIKDIHEYLSQRLRIKEEDMRLW- 669

  Fly   663 VPQLDNGAILLEEDAMCLKELLIRDNDQLLLEIRNKDLTWPEELGSLATAQCGQGAGTPGDRRRL 727
            :...:|...||:::...|:.|.|.|...|::|:||||::||||:..:|.:       :..||.::
Zfish   670 LYNSENYLTLLDDEDHTLESLKIPDEQHLVIEVRNKDMSWPEEMSFIANS-------SKIDRHKV 727

  Fly   728 TRSSIMSVHAPGATGLHNLGNTCFMNAALQVLFNTQPLAQYFQREMHRFEVNAANKLGTKGQLAM 792
            ....       |||||.|||||||||:::|.:.||:||.:||....|.:|:|..|.:|.:|.:|.
Zfish   728 PTEK-------GATGLSNLGNTCFMNSSIQCVSNTKPLTEYFISGRHLYELNRTNPIGMRGHMAK 785

  Fly   793 RYAELLKEVWTATTRSVAPLKLRFCVNKYAPQFAGGGQHDSQELLEWLLDALHEDLNRVMEKPYS 857
            .|.:|::|:|:.|.::|||||||:.:.||||:|.|..|.||||||.:|||.||||||||.||||.
Zfish   786 CYGDLVQELWSGTQKNVAPLKLRWTIAKYAPRFNGFQQQDSQELLAFLLDGLHEDLNRVHEKPYV 850

  Fly   858 ELKDSNGRPDKIVAAEAWSQHHARNQSIIIDLFYGQLKSKVSCLGCGHESVRFDPFSLLSLPLPV 922
            |||||:||||..||.|||..|..||:||::|||:|||:|:|.|..|||.|.|||||:.||||||:
Zfish   851 ELKDSDGRPDHEVATEAWENHLRRNRSIVVDLFHGQLRSQVKCKTCGHISARFDPFNFLSLPLPM 915

  Fly   923 ENYIYFEVLVILLDGSVPIKYGFRLNSDCKYSHLKHKLSTMCSLPPNLMLVCELWNSQIRQVLND 987
            ::.::.|:.||.||||.|::||.|||.|.||..||.:||.:|||.|..:|:.|:..|.|:....|
Zfish   916 DSSMHLEITVIKLDGSTPVRYGLRLNMDEKYMGLKKQLSELCSLKPEQILLAEVHTSNIKNFPLD 980

  Fly   988 DEKLRTQSAKELYVYQLPEQSMRTRSNSGLSMHIEQGLKDIQRSSALITSAQDSLSSLSTLQTSS 1052
            ::|:|......|..:::|.....|                               |..|.:||..
Zfish   981 NQKVRHSVNGFLCAFEIPVPGSPT-------------------------------SVTSPVQTEK 1014

  Fly  1053 HRASSRVLCNGHVSGLDVEGEAEVGTDVSQCNSNSNYNPIVSTYSGNGSGDNQVHELLPDEAGKV 1117
                                                 .||.:..:||    |.:           
Zfish  1015 -------------------------------------PPIANGTAGN----NHI----------- 1027

  Fly  1118 SRCFGKRECMPHSLFCFKESLILSSSPENTFMHGAAAQQKRVSSAKLLHTESNTSSMSYTNHSGE 1182
                ||...:|                                                      
Zfish  1028 ----GKSGLIP------------------------------------------------------ 1034

  Fly  1183 NSMESSLTEPIPLADLEPVSSRNGSGGEDCSYRTSPNDSSGLSTGHTLGASLDVDEQAEEGNAED 1247
            |.|.|::   :|....:|:                   ::|:..||    ::.|.:....|    
Zfish  1035 NGMPSTV---VPCTLEKPL-------------------ANGIPNGH----AVPVQDSPFIG---- 1069

  Fly  1248 HDQPDQITTSQPETSSGVYSRRSSQPPHKAGKYLVAVHRKITRHDSYFLSYHKTRPSLFGVPLLI 1312
                                            |::|:|||:.|.:.||||..|.||||||:||::
Zfish  1070 --------------------------------YIIAMHRKMMRTELYFLSSQKNRPSLFGMPLIV 1102

  Fly  1313 PNSEGGTHKDLYCAVWLQVSRLLSPLPATTEQANHAADCDDSLGYDFPFTLRAVKADGLTCAICP 1377
            |.:...:.||||.|||:|||||.|||| ..|.:|||.||||||||.:|||||.|:.||.:||.||
Zfish  1103 PCTVHTSKKDLYDAVWIQVSRLASPLP-PQEASNHAQDCDDSLGYQYPFTLRVVQKDGNSCAWCP 1166

  Fly  1378 WSSFCRGCEIRCNNDYVLQGALPPINAAASNTSTPKMNAKFPSLPNLEAKRTPEYTASLSYTPTT 1442
            |..|||||.:.||.|..                         ||.|             :|    
Zfish  1167 WYRFCRGCTVDCNEDRA-------------------------SLGN-------------AY---- 1189

  Fly  1443 KYFEDFTIAIDWDPTALHLRYQSTLERLWVDHETIAISRREQVEPVDLNHCLRAFTSEEKL--EQ 1505
                   ||:||||||||||||::.||:..:|.::..|||.|.||:.|:.||:||||||:|  ::
Zfish  1190 -------IAVDWDPTALHLRYQTSQERIVEEHPSVEQSRRAQAEPISLDSCLKAFTSEEELGEDE 1247

  Fly  1506 WYHCSHCKGKKPATKKLQIWKLPPILIVHLKRFNCVNGKWVKSQKVVHFPFDDFDPTPYLASVPQ 1570
            .|:||.||..:.|||||.:|:|||:||||||||..|||:|:||||:|.||.:.|||:.:||  |:
Zfish  1248 LYYCSKCKTHRLATKKLDLWRLPPVLIVHLKRFQFVNGRWIKSQKIVKFPRESFDPSAFLA--PR 1310

  Fly  1571 ETILRHKELLELKNDAEMTMATNEVVSELDEIDAPSKEVKEELPNQTGSTKATASPPPTG----- 1630
            |.......|..|:::.        :|.||..::.....|      .:.||...||||.:|     
Zfish  1311 EVSQSLGSLQSLQSEC--------LVEELQRLERGDSSV------SSISTTTLASPPISGRATPC 1361

  Fly  1631 -----------NILRQSKTKNAVRRQ------------RLIS---------------TSLTKTPI 1657
                       |....|..:|..|:|            ||.:               :...::.:
Zfish  1362 SIRRVGSPLSRNSSPGSSPRNTGRKQGRLRLPQLGSRHRLCNSKENLEACSTNKESESEAEQSAV 1426

  Fly  1658 VDGEFEDYHQHRLKPDVDQFD--------------------------------------PR---- 1680
            .|||       .|.||.:..|                                      |.    
Zfish  1427 TDGE-------NLTPDANTQDTWSLDASSNDCDVIMVNGLGQDSSQSNGHSEVSADLDTPHQRND 1484

  Fly  1681 ------YRLYAVVSHSGMLNGGHYISYASNATGSWYCYNDSSCREISQKPVIDPSAAYLLFYERK 1739
                  |.|||:..|||::.||||::||.|....|||||||||:|: ....||..:||:||||::
Zfish  1485 ICLESLYNLYAISCHSGIMGGGHYVTYAKNPNEKWYCYNDSSCKEV-HSDEIDTDSAYILFYEQQ 1548

  Fly  1740 GLDYEPYLPNIEGRTLPNTASVPLEVDETEGELKKLC 1776
            |:||..:||..||:.:.:|.|:.   ::.|.:.||.|
Zfish  1549 GVDYSQFLPKTEGKKMADTTSMD---EDFESDYKKYC 1582

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp32NP_001262074.2 FRQ1 186..317 CDD:227455 73/131 (56%)
UBP12 486..>1002 CDD:227847 236/528 (45%)
Peptidase_C19 <1480..1737 CDD:351799 114/349 (33%)
usp32XP_686236.6 EF-hand_7 236..293 CDD:290234 41/56 (73%)
EFh 237..293 CDD:238008 40/55 (73%)
EF-hand_7 270..342 CDD:290234 30/82 (37%)
EFh 270..338 CDD:298682 28/78 (36%)
DUSP <519..586 CDD:283896 34/67 (51%)
UBP12 521..1546 CDD:227847 462/1339 (35%)
Ubiquitin_3 623..710 CDD:291502 37/100 (37%)
Peptidase_C19 733..>918 CDD:271592 110/184 (60%)
Peptidase_C19 <1220..1546 CDD:271592 114/349 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 631 1.000 Domainoid score I168
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H13066
Inparanoid 1 1.050 1097 1.000 Inparanoid score I230
OMA 1 1.010 - - QHG52451
OrthoDB 1 1.010 - - D1283205at2759
OrthoFinder 1 1.000 - - FOG0007271
OrthoInspector 1 1.000 - - oto39905
orthoMCL 1 0.900 - - OOG6_104647
Panther 1 1.100 - - LDO PTHR21646
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X4685
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1211.980

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