DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Usp32 and usp33

DIOPT Version :9

Sequence 1:NP_001262074.2 Gene:Usp32 / 40169 FlyBaseID:FBgn0036913 Length:1779 Species:Drosophila melanogaster
Sequence 2:NP_001016228.1 Gene:usp33 / 548982 XenbaseID:XB-GENE-1016674 Length:892 Species:Xenopus tropicalis


Alignment Length:1176 Identity:207/1176 - (17%)
Similarity:307/1176 - (26%) Gaps:599/1176 - (50%)


- Green bases have known domain annotations that are detailed below.


  Fly   640 VRQVGEFLCEQLRLKS----EDIR-----LW---------------HVPQLDNGAILLEEDAMCL 680
            :..|||...|:|..||    :|.|     ||               ||   |:..:..::...||
 Frog    11 LESVGEVTKEELIKKSHGSCQDCRVRGPNLWACLENGCSYVGCGESHV---DHSTLHSQDTKHCL 72

  Fly   681 KELLIRDNDQLLLEIR------NKDLTWPEELGSLATAQCGQGAGTPGDRRRLTRSSIMSVHAP- 738
                    ...|..:|      :|::....:|.:..|:...|.:.|...:    .||.:::..| 
 Frog    73 --------TVNLTTLRVWCYTCSKEVFLDRKLSTQPTSAKLQDSHTQESK----MSSSLTLKIPA 125

  Fly   739 --------------------GATGLHNLGNTCFMNAALQVLFNTQPLAQYFQREMHRFEVNAANK 783
                                |.|||.|:||||:||||||.|.|..||..||      .:.....:
 Frog   126 AVVSENLDIELEEEDELKTRGLTGLKNIGNTCYMNAALQALSNCPPLTHYF------LDCGGLAR 184

  Fly   784 LGTKGQLAMRYAELLKEVWTATTRS-VAPLKLRFCVNKYAPQFAGGGQHDSQELLEWLLDALHED 847
            ...|..|...|.:|:.::|...... |.|..|...:....|.|.|..|.|:||.|..|:|.||| 
 Frog   185 TDKKPALCKSYQKLMSDIWHKNRPGFVIPTNLFQGIKSVNPTFRGYSQQDAQEFLRCLMDVLHE- 248

  Fly   848 LNRVMEKPYSELKDSNGRPDKIVAAEAWSQHHARNQSIIIDLFYGQLKSKVSCLGCGHESVRFDP 912
                      |||:                                                   
 Frog   249 ----------ELKE--------------------------------------------------- 252

  Fly   913 FSLLSLPLPVENYIYFEVLVILLDGSVPIKYGFRLNSDCKYSHLKHKLSTMCSLPPNLMLVCELW 977
                                                                             
 Frog   253 ----------------------------------------------------------------- 252

  Fly   978 NSQIRQVLNDDEKLRTQSAKELYVYQLPEQSMRTRSNSGLSMHIEQGLKDIQRSSALITSAQDSL 1042
                 |::..:|..:|...:|                                            
 Frog   253 -----QIVEVEEDAQTGIVEE-------------------------------------------- 268

  Fly  1043 SSLSTLQTSSHRASSRVLCNGHVSGLDVEGEAEVGTDVSQCNSNSNYNPIVSTYSGNGSGDNQVH 1107
                                    .|| |.:::...|...|:|.|:                   
 Frog   269 ------------------------NLD-EDKSQSDNDFHSCDSGSS------------------- 289

  Fly  1108 ELLPDEAGKVSRCFGKRECMPHSLFCFKESLILSSSPENTFMHGAAAQQKRVSSAKLLHTESNTS 1172
               .|.|...||...:.         ..||.:|        :|   ..||.|...|....|...|
 Frog   290 ---SDHAESESRKLSEE---------LTESTML--------IH---EDQKDVEICKTWQKEKKFS 331

  Fly  1173 SMSYTNH---SGENSMESSLTEPIPLADLEPVSSRNGSGGEDCSYRTSPNDSSGLSTGHTLGASL 1234
            :....||   ..|.:::|::.|...|.. |.|..:..|...|.:...:.||              
 Frog   332 NNLNQNHFLQDFEKNIQSTIEESECLKQ-ETVKVQIQSKAADFTAEVNMND-------------- 381

  Fly  1235 DVDEQAEEGNAEDHDQPDQITTSQ-PETSSGVYSRRSSQPPHKAGKYLVAVHRKI-------TRH 1291
                               :.||| |..:.|..:..||.|| |.|..... |:|:       .|.
 Frog   382 -------------------LPTSQTPLLNEGATTHLSSSPP-KPGAVWTG-HKKVPGLCPAKKRK 425

  Fly  1292 DSYFLSYHKTRPSLFGVPLLIPNSEGGTHKDLYC------AVWLQVSRLLS-PLPATTEQAN-HA 1348
            ..   .||.....:|         :|.....:.|      :|.|:..:.|| |:|...:.|. |:
 Frog   426 QK---KYHSVIADIF---------DGTIVSSVQCLTCDRVSVTLETFQDLSLPIPGKEDLAKLHS 478

  Fly  1349 ADCDDSLGYDFPFTLRAVKADGLTCAICPWSSFCRGCEIRCNNDYVLQGALPPINAAASNTSTPK 1413
            :....||          |||..                  |...|..||.:              
 Frog   479 SSHQSSL----------VKAGS------------------CGEAYAPQGWI-------------- 501

  Fly  1414 MNAKFPSLPNLEAKRTPEYTASLSYTPTTKYFEDFTIAIDWDPTALHLRYQSTLERLWVDHETIA 1478
              |.|                       .:||:.:.    |.||                     
 Frog   502 --AFF-----------------------LEYFKSWF----WGPT--------------------- 516

  Fly  1479 ISRREQVEPVDLNHCLRAFTSEEKL--EQWYHCSHCKGKKPATKKLQIWKLPPILIVHLKRFNCV 1541
                     |.|..||.||.:.::|  :..|.|..||..:...|..::.|.|.||.:|||||   
 Frog   517 ---------VTLQDCLAAFFARDELKGDNMYSCEKCKKLRNGVKFCKVQKFPEILCIHLKRF--- 569

  Fly  1542 NGKWVKSQKV---VHFPFDDFDPTPYLASVPQETILRHKELLELKNDAEMTMATNEVVSELDEID 1603
            ..:.:.|.|:   |.||.:..|..|:||.                                   |
 Frog   570 RHELMFSTKIGTHVSFPLEGLDLQPFLAK-----------------------------------D 599

  Fly  1604 APSKEVKEELPNQTGSTKATASPPPTGNILRQSKTKNAVRRQRLISTSLTKTPIVDGEFEDYHQH 1668
            :||:.|                                                           
 Frog   600 SPSQIV----------------------------------------------------------- 605

  Fly  1669 RLKPDVDQFDPRYRLYAVVSHSGMLNGGHYISYA-SNATGSWYCYNDSSCREISQKPVIDPSAAY 1732
                       .|.|.:|:.|.|..:.||||:|. :|....||.::|.|..|:|: ..:..:.||
 Frog   606 -----------TYDLLSVICHHGTASSGHYIAYCRNNLNNLWYEFDDQSVTEVSE-ATVQNAEAY 658

  Fly  1733 LLFYER 1738
            :|||.:
 Frog   659 VLFYRK 664

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp32NP_001262074.2 FRQ1 186..317 CDD:227455
UBP12 486..>1002 CDD:227847 75/413 (18%)
Peptidase_C19 <1480..1737 CDD:351799 55/262 (21%)
usp33NP_001016228.1 zf-UBP 30..90 CDD:280334 12/70 (17%)
UCH 147..662 CDD:278850 178/1021 (17%)
Peptidase_C19 148..>178 CDD:271592 20/35 (57%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 268..311 15/150 (10%)
Peptidase_C19R 430..663 CDD:239139 83/451 (18%)
DUSP 684..764 CDD:197831
DUSP 790..871 CDD:197831
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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