DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp32 and usp45

DIOPT Version :9

Sequence 1:NP_001262074.2 Gene:Usp32 / 40169 FlyBaseID:FBgn0036913 Length:1779 Species:Drosophila melanogaster
Sequence 2:NP_001362196.1 Gene:usp45 / 496571 XenbaseID:XB-GENE-5800887 Length:806 Species:Xenopus tropicalis


Alignment Length:577 Identity:133/577 - (23%)
Similarity:221/577 - (38%) Gaps:142/577 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   679 CLKELLIRDNDQLLLEI---------------RNKDLTWPEELGSLATAQCGQGAGTPGDRRRLT 728
            |.:|||...|.::|.::               .:|.:...|:.......|.|             
 Frog   130 CDEELLTHCNKKVLAQMVDFLQKHSTRSAKGCSSKVIVLHEQRSKACETQKG------------- 181

  Fly   729 RSSIMSVHAPGATGLHNLGNTCFMNAALQVLFNTQPLAQYFQREMH----RFEVNAAN------- 782
             :|:.:..:....|::|||||||.||.:|.|..|..|:... .||.    :.::|::.       
 Frog   182 -NSVSTCASVPVKGINNLGNTCFFNAVMQNLAQTHMLSDTL-NEMKEKGTKLKINSSEDVHLDPL 244

  Fly   783 --KLGTKGQLAMRYAELLKEVWTATTRSVAPLKLRFCVNKYAPQFAGGGQHDSQELLEWLLDALH 845
              .|.:.|.|.......|..:..|....::|..|...:.:.||:|....|.||||||.:||||:.
 Frog   245 VISLSSPGSLTSAVLLFLHNMKEAGKEPLSPKVLFSQLCQKAPRFKAFQQQDSQELLHYLLDAMR 309

  Fly   846 -EDLNRVMEKPYSELKDSNGRPDKIVAAE------AWSQHHARNQSIIIDLFYGQLKSKVSCLGC 903
             |:..|:..   ..||..|....|....|      |:.:...: .:.|..:|.|:|.|.|.|..|
 Frog   310 IEETKRIQS---GILKAFNNPTTKTADEETKRKVKAYGKEGVK-MNFIDRIFVGELTSTVMCEEC 370

  Fly   904 GHESVRFDPFSLLSLPLPVENYIYFEVLVILLDGSVPIKYGFRLNSDCKYSHLKHKLSTMCSLPP 968
            .|.|...:.|..||||: :|..:           |.|...| || |.||            |...
 Frog   371 EHISAVREAFIDLSLPI-IEERV-----------SKPAISG-RL-SKCK------------SAQE 409

  Fly   969 NLMLVCELWNSQIRQVLNDDEKLRTQSAKELYVYQLPEQSMRTRSNSGLSMH--IEQGLKDIQRS 1031
            :..:.|:..|:|..::    .|..|.:..:|       ...:|:|.||....  |.||..|::.:
 Frog   410 DNSIQCKCINNQHMRL----HKKHTLTKNQL-------NRGKTKSASGDENRNLIMQGNDDVRTA 463

  Fly  1032 SALITS--AQDSLSSLSTLQTSSHRASSRVLCNGHVSGLDVEGEAEVGTDVSQCNSNSNYNP--- 1091
            ...|.|  ||:|:.....|.|.|....|.   ....|.|:..|:|:     |:.:...|..|   
 Frog   464 GTRINSTYAQESIPVNQNLNTVSQSDGSE---QNDSSQLESSGDAD-----SEASEYENSEPQAD 520

  Fly  1092 --------IVSTYSGNGSGDN-QVHELLP---------------DEAGKVSRCFGKRECMPHSLF 1132
                    :.|:::.|.:.|: |.|:::.               :.:.:.|..|||.:.:..:  
 Frog   521 KSISLDSTLHSSHNKNITLDSCQHHDVVGFGHDAVTGPLSKLGINSSEEDSGSFGKEQLLGFT-- 583

  Fly  1133 CFKESLILSSSPENTFM---HGAAAQQKRVSSAKLLHTESNTSSMSYTNHSGENSME 1186
              .|:.:||.:|:..|.   ||...:.|..|....|:..::...:     .|.|.::
 Frog   584 --HENCVLSQNPQTAFQTLSHGYITRPKECSVQSCLYQFTSVELL-----MGNNKLQ 633

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp32NP_001262074.2 FRQ1 186..317 CDD:227455
UBP12 486..>1002 CDD:227847 88/357 (25%)
Peptidase_C19 <1480..1737 CDD:351799
usp45NP_001362196.1 zf-UBP 81..134 CDD:396634 1/3 (33%)
UBP12 <177..806 CDD:227847 125/530 (24%)
Peptidase_C19 194..>390 CDD:351799 61/201 (30%)
Peptidase_C19K <609..803 CDD:239132 5/30 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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