DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp32 and usp2a

DIOPT Version :10

Sequence 1:NP_001262074.2 Gene:Usp32 / 40169 FlyBaseID:FBgn0036913 Length:1779 Species:Drosophila melanogaster
Sequence 2:XP_005157570.1 Gene:usp2a / 494031 ZFINID:ZDB-GENE-041212-59 Length:564 Species:Danio rerio


Alignment Length:612 Identity:167/612 - (27%)
Similarity:248/612 - (40%) Gaps:157/612 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   583 QTGVGGGTQLGSWGSTVSGGYGV-LASGGGYAAIAVSSVLQPPKRYLAYTAAFSRLATVRQVGEF 646
            :|.:.||.:..|...|...|||. |..|.||::.   |....|..||:.:...|.::..|     
Zfish    80 RTDLLGGRRSESLSRTPVKGYGSGLNGGSGYSSY---SYTPAPSSYLSSSPVSSSISLSR----- 136

  Fly   647 LCEQLRLKSEDIRLWHVPQLDNGAILLEE--DAMCLKE-LLIRDNDQLLLEIRNKDLTWPEELGS 708
                 |.......|.|    |..|:.|.|  ....||: .|.|.:|     :.:...:....|| 
Zfish   137 -----RKSVSQSDLTH----DLSALGLSETSSGSGLKQSYLSRGSD-----VSDSYSSSRSSLG- 186

  Fly   709 LATAQCGQGAGTPG--------DRRRLT---RSSIMSVHAPGATGLHNLGNTCFMNAALQVLFNT 762
            |:.:...:|.|:.|        ...|.|   |.|:.|..|.|..||.|||||||||:.||.|.||
Zfish   187 LSRSSTQEGLGSSGLKSSSRFSSSYRSTSPVRESLNSKSAQGLVGLRNLGNTCFMNSILQCLSNT 251

  Fly   763 QPLAQYFQREMHRFEVNAANKLGTKGQLAMRYAELLKEVWT-ATTRSVAPLKLRFCVNKYAPQFA 826
            |.|..|.....||.::|..|:  |...|...:|:|::.:|| :::.:|:|.:.:..:.:|||:|.
Zfish   252 QSLRDYCLHNSHRRDLNNNNR--THTALMEEFAKLIQTMWTSSSSEAVSPSEFKTQIQRYAPRFV 314

  Fly   827 GGGQHDSQELLEWLLDALHEDLNRVMEKPYSELKDSNGRPDKIVAAEAWSQHHARNQSIIIDLFY 891
            |..|.|:||.|.:|||.||.::|||..:|....:|.:..||:....:.||::..|..|.|:|||.
Zfish   315 GYNQQDAQEFLRFLLDGLHNEVNRVTVRPRGNTEDFDHLPDEEKGKKMWSKYLEREDSKIVDLFV 379

  Fly   892 GQLKSKVSCLGCGHESVRFDPFSLLSLPLPVENYIYFEVLVILLDGSVPIKYGFRLNSDCKYSHL 956
            |||||.::|..||:.|..||||..||||:..:.|           |.|.:       .||.....
Zfish   380 GQLKSSLTCSECGYCSTVFDPFWDLSLPIAKKGY-----------GEVSL-------MDCMRLFT 426

  Fly   957 KHKLSTMCSLPPNLMLVCELWNSQIRQVLNDDE-------KLRTQSAKELYVYQLPEQSMRTRSN 1014
            |                        ..||:.||       |.|.:..|:..|.:.|:.       
Zfish   427 K------------------------EDVLDGDEKPTCYRCKARRRCTKKFTVQKFPKI------- 460

  Fly  1015 SGLSMHIEQGLKDIQRSSALITSAQDSLSSLSTLQTSSHRASSRVLCNGHVSGLDVEGEAEVGTD 1079
              |.:|:::..:...|:|.|.|.....:..|...:.:|.|:||.|                    
Zfish   461 --LVLHLKRFSEARIRTSKLSTFVNFPMKDLDLREFASDRSSSAV-------------------- 503

  Fly  1080 VSQCNSNSNYN-PIVSTYSGNGSGDNQVHELLPDEAGKVSRCFGKRECMPHS--LFCFKESLILS 1141
                     || ..||.:||...|.:.           .:.|     |.|.:  .:.:.:|.:..
Zfish   504 ---------YNLYAVSNHSGTTMGGHY-----------TAYC-----CNPENGEWYTYNDSRVTP 543

  Fly  1142 SSPENTFMHGAAAQQKRVSSAKLLHTE 1168
            .|          |.|.|.|.|.:|..|
Zfish   544 MS----------ASQVRSSDAYVLFYE 560

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp32NP_001262074.2 EFh_PI-PLC 198..>251 CDD:333715
EF-hand motif 198..222 CDD:320029
EF-hand_7 227..290 CDD:463900
UBP12 486..>1002 CDD:227847 134/441 (30%)
Peptidase_C19 <1480..1737 CDD:470612
usp2aXP_005157570.1 Peptidase_C19R 231..560 CDD:239139 123/436 (28%)
Blue background indicates that the domain is not in the aligned region.

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