DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp32 and Usp8

DIOPT Version :10

Sequence 1:NP_001262074.2 Gene:Usp32 / 40169 FlyBaseID:FBgn0036913 Length:1779 Species:Drosophila melanogaster
Sequence 2:NP_650948.2 Gene:Usp8 / 42509 FlyBaseID:FBgn0038862 Length:896 Species:Drosophila melanogaster


Alignment Length:249 Identity:85/249 - (34%)
Similarity:123/249 - (49%) Gaps:41/249 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   739 GATGLHNLGNTCFMNAALQVLFNTQPLAQYFQREMHRFEVNAANKLGTKGQLAMRYAELLKEVWT 803
            |.|||.||||||:||:.||.|.||..|.:|...:.::..::.:||  |.||:....|.|:||:|.
  Fly   561 GLTGLKNLGNTCYMNSILQCLSNTPQLTEYCISDKYKNYISRSNK--TNGQVIEEVAALIKELWN 623

  Fly   804 ATTRSVAPLKLRFCVNKYAPQFAGGGQHDSQELLEWLLDALHEDLNRVMEKPYSELKDSNGRPDK 868
            ...:.||...||:.|.:|...|.|..|.||.|.|..|:|.||.|| :.:..|         |..:
  Fly   624 GQYKCVASRDLRYVVGQYQKIFRGVDQQDSHEFLTILMDWLHSDL-QTLHVP---------RQRE 678

  Fly   869 IVAA--EAWSQHHARNQSIIIDLFYGQLKSKVSCLGCGHESVRFDPFSLLSLPLPVENYI----- 926
            :::|  :||.:.....:|:|:.|||||:||.|.|:.|..||..::.||.|||.||..:.:     
  Fly   679 MISASEKAWLEFTKAKESMILHLFYGQMKSTVKCVACHKESATYESFSNLSLELPPNSNVCQLNQ 743

  Fly   927 ----YFEVLVILLDGSVPIKYGFRLNS----DCKYSHLKHKLSTMCSLPPNLML 972
                ||.              |.|::.    .||......|...:..|||.|::
  Fly   744 CMDMYFS--------------GERIHGWNCPSCKTKRDAIKKLDISKLPPVLVV 783

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp32NP_001262074.2 EFh_PI-PLC 198..>251 CDD:333715
EF-hand motif 198..222 CDD:320029
EF-hand_7 227..290 CDD:463900
UBP12 486..>1002 CDD:227847 85/249 (34%)
Peptidase_C19 <1480..1737 CDD:470612
Usp8NP_650948.2 USP8_dimer 2..114 CDD:462647
RHOD 148..278 CDD:444705
Smc <361..>511 CDD:440809
Peptidase_C19R 564..887 CDD:239139 83/246 (34%)
Blue background indicates that the domain is not in the aligned region.

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