DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp32 and Usp3

DIOPT Version :10

Sequence 1:NP_001262074.2 Gene:Usp32 / 40169 FlyBaseID:FBgn0036913 Length:1779 Species:Drosophila melanogaster
Sequence 2:NP_001020595.2 Gene:Usp3 / 363084 RGDID:1308852 Length:520 Species:Rattus norvegicus


Alignment Length:340 Identity:90/340 - (26%)
Similarity:139/340 - (40%) Gaps:99/340 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   724 RRRLTRSSIM---------SVHAPGATGLHNLGNTCFMNAALQVLFNTQPLAQYFQREMHRFEVN 779
            :|:|..:|.:         |..|..||||.||||||||||.||.|.|.:....|| :|:...|:.
  Rat   133 KRKLLENSSLNSKLLKVNGSTAAICATGLRNLGNTCFMNAILQSLSNIEQFCCYF-KELPAVELR 196

  Fly   780 AANKLG-----TKGQ------LAMRYAELLKEVWTATTRSVAPLKLRFCVNKYAPQFAGGGQHDS 833
            .....|     |:.|      |...:.:.|..:|..:..:.:|..|.:.|.|..|.|.|..|.|:
  Rat   197 NGKTAGRRTYHTRSQGDSNVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDA 261

  Fly   834 QELLEWLLDALHEDLNRVMEKPYSELKDSNGRPDKIVAAEAWSQHHARNQ-------SIIIDLFY 891
            .|.:.:|||.||.:|.          ...||.....:..|. |...|.|:       :::..:|.
  Rat   262 HEFMRYLLDHLHLELQ----------GGFNGVSRSAILQEN-STLSANNKCCINGASTVVTTIFG 315

  Fly   892 GQLKSKVSCLGCGHESVRFDPFSLLSLPLPVENYIYFEVLVILLDGSVPIKYGFRLNSDCKYSHL 956
            |.|:::|:||.||.||.:||||..|||.:|                                |..
  Rat   316 GILQNEVNCLICGTESRKFDPFLDLSLDIP--------------------------------SQF 348

  Fly   957 KHKLS------TMCSLPPNLMLVCELWNSQIRQVLNDDE-------KLRTQSAKELYVYQLPEQS 1008
            :.|.|      .:|||...|....:|      :.|::.|       |.:.:|.|:.::.:||:  
  Rat   349 RSKRSKNQENGPVCSLRDCLRSFTDL------EELDETELYMCHKCKKKQKSTKKFWIQKLPK-- 405

  Fly  1009 MRTRSNSGLSMHIEQ 1023
                   .|.:|:::
  Rat   406 -------ALCLHLKR 413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp32NP_001262074.2 EFh_PI-PLC 198..>251 CDD:333715
EF-hand motif 198..222 CDD:320029
EF-hand_7 227..290 CDD:463900
UBP12 486..>1002 CDD:227847 86/317 (27%)
Peptidase_C19 <1480..1737 CDD:470612
Usp3NP_001020595.2 zf-UBP 29..105 CDD:460464
UCH 159..508 CDD:425685 84/314 (27%)
Blue background indicates that the domain is not in the aligned region.

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