DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Usp32 and Usp20

DIOPT Version :10

Sequence 1:NP_001262074.2 Gene:Usp32 / 40169 FlyBaseID:FBgn0036913 Length:1779 Species:Drosophila melanogaster
Sequence 2:NP_001101297.1 Gene:Usp20 / 311856 RGDID:1305621 Length:915 Species:Rattus norvegicus


Alignment Length:1042 Identity:184/1042 - (17%)
Similarity:260/1042 - (24%) Gaps:541/1042 - (51%)


- Green bases have known domain annotations that are detailed below.


  Fly   739 GATGLHNLGNTCFMNAALQVLFNTQPLAQYFQREMHRFEVNAANKLGTKGQLAMRYAELLKEVWT 803
            |.||:.||||:|:||||||.|.|..||.|:|      .|.....:...|..|...|.:|:.|||.
  Rat   143 GLTGMKNLGNSCYMNAALQALSNCPPLTQFF------LECGGLVRTDKKPALCKSYQKLISEVWH 201

  Fly   804 ATTRS-VAPLKLRFCVNKYAPQFAGGGQHDSQELLEWLLDALHEDLNRVMEKPYSELKDSNGRPD 867
            ....| |.|..|...:....|.|.|..|.|:||.|..|:|.|||:|...|               
  Rat   202 KKRPSYVVPTSLSHGIKLVNPMFRGYAQQDTQEFLRCLMDQLHEELKEPM--------------- 251

  Fly   868 KIVAAEAWSQHHARNQSIIIDLFYGQLKSKVSCLGCGHESVRFDPFSLLSLPLPVENYIYFEVLV 932
              |||                                                            
  Rat   252 --VAA------------------------------------------------------------ 254

  Fly   933 ILLDGSVPIKYGFRLNSDCKYSHLKHKLSTMCSLPPNLMLVCELWNSQIRQVLNDDEKLRTQSAK 997
                                                                             
  Rat   255 ----------------------------------------------------------------- 254

  Fly   998 ELYVYQLPEQSMRTRSNSGLSMHIEQGLKDIQRSSALITSAQDSLSSLSTLQTSSHRASSRVLCN 1062
                                              .|.:|.|:||.||.:..:....|:.|.    
  Rat   255 ----------------------------------VAALTDARDSDSSDTDERRDGDRSPSE---- 281

  Fly  1063 GHVSGLDVEGEAEVGTDVSQCNSNSNYNPIVSTYSGNGSGDNQVHELLPDEAGKVSRCFGKRECM 1127
                           .:...|:|:|:.........|.||...::..|:.||||:           
  Rat   282 ---------------DEFLSCDSSSDRGEGDGQGRGGGSSKAEMELLISDEAGR----------- 320

  Fly  1128 PHSLFCFKESLILSSSPENTFMHGAAAQQKRVSSAKLLHTESNTSSMSYTNHSGENSMESSLTEP 1192
                                    |.::::|:...|....:..|:|                   
  Rat   321 ------------------------AISEKERMKDRKFSWGQQRTNS------------------- 342

  Fly  1193 IPLADLEPVSSRNGSGGEDCSYRTSPNDSSGLSTGHTLGASLDVDEQAEEGNAEDHDQPDQITTS 1257
                  |.|.       ||....|               |...:|||:.|.     ..|....||
  Rat   343 ------EQVD-------EDADVDT---------------AMASLDEQSREA-----QPPSPRPTS 374

  Fly  1258 ---QPETSSGVYSRRSSQP----PHKAGKYLVAVHRKITRHDSYFLSYHKTRPSLFGVPLL---- 1311
               .||..:.|:.|.||:|    .|..|      |.|::.      |..:..|...|...:    
  Rat   375 PCQTPEPDNEVHIRSSSRPCSPVHHHEG------HTKLSS------SPPRASPVRMGPSYVLKKA 427

  Fly  1312 -IPNSEGGTHKD------------------LYCAVWLQVSR-------LLSPLPATTEQAN-HAA 1349
             :|::.|...|:                  :.|....:||.       |..|:|...:.|. |:|
  Rat   428 QVPSTGGRRRKEQSYRSVISDVFNGSVLSLVQCLTCDRVSTTVETFQDLSLPIPGKEDLAKLHSA 492

  Fly  1350 DCDDSLGYDFPFTLRAVKADGLTCAICPWSSFCRGCEIRCNNDYVLQGALPPINAAASNTSTPKM 1414
                 :..:.|....|                       |.:.|..||.|..|            
  Rat   493 -----IYQNVPAKPGA-----------------------CGDSYSSQGWLAFI------------ 517

  Fly  1415 NAKFPSLPNLEAKRTPEYTASLSYTPTTKYFEDFTIAIDWDPTALHLRYQSTLERLWVDHETIAI 1479
                           .||......:.|..:|        |.|.                      
  Rat   518 ---------------VEYIRRFVVSCTPSWF--------WGPV---------------------- 537

  Fly  1480 SRREQVEPVDLNHCLRAFTSEEKL--EQWYHCSHCKGKKPATKKLQIWKLPPILIVHLKRFNCVN 1542
                    |.|..||.||.:.::|  :..|.|..||..:...|..::..||.||.||||||....
  Rat   538 --------VTLEDCLAAFFAADELKGDNMYSCERCKKLRNGVKYCKVLCLPEILCVHLKRFRHEV 594

  Fly  1543 GKWVKSQKVVHFPFDDFDPTPYLASVPQETILRHKELLELKNDAEMTMATNEVVSELDEIDAPSK 1607
            ....|....|.||.:..|..|:||          ||            .|::|.:          
  Rat   595 MYSFKVSSHVSFPLEGLDLRPFLA----------KE------------CTSQVTT---------- 627

  Fly  1608 EVKEELPNQTGSTKATASPPPTGNILRQSKTKNAVRRQRLISTSLTKTPIVDGEFEDYHQHRLKP 1672
                                                                             
  Rat   628 ----------------------------------------------------------------- 627

  Fly  1673 DVDQFDPRYRLYAVVSHSGMLNGGHYISYASNA-TGSWYCYNDSSCREISQKPVIDPSAAYLLFY 1736
                    |.|.:|:.|.|....||||:|..|. .|.||.::|....|: .:.|:....||:|||
  Rat   628 --------YDLLSVICHHGTAGSGHYIAYCQNVINGQWYEFDDQYVTEV-HETVVQNVEAYVLFY 683

  Fly  1737 ER 1738
            .:
  Rat   684 RK 685

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp32NP_001262074.2 EFh_PI-PLC 198..>251 CDD:333715
EF-hand motif 198..222 CDD:320029
EF-hand_7 227..290 CDD:463900
UBP12 486..>1002 CDD:227847 50/263 (19%)
Peptidase_C19 <1480..1737 CDD:470612 55/259 (21%)
Usp20NP_001101297.1 zf-UBP 30..90 CDD:460464
UCH 145..683 CDD:425685 181/1036 (17%)
DUSP 703..786 CDD:197831
DUSP 811..895 CDD:197831
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.