DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Usp32 and Usp50

DIOPT Version :10

Sequence 1:NP_001262074.2 Gene:Usp32 / 40169 FlyBaseID:FBgn0036913 Length:1779 Species:Drosophila melanogaster
Sequence 2:NP_001417364.1 Gene:Usp50 / 311399 RGDID:1564751 Length:385 Species:Rattus norvegicus


Alignment Length:292 Identity:82/292 - (28%)
Similarity:126/292 - (43%) Gaps:45/292 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   712 AQCGQGAGTPGDRRRLTRSSIMSVHAPGATGLHNLGNTCFMNAALQVLFNTQPLAQYFQREMHRF 776
            |:|......|        .|....|..|.|||.||||||:|||.||.|.:|.||.:||....:  
  Rat    19 AECADYDSLP--------ESETQPHFQGVTGLRNLGNTCYMNAILQCLCSTSPLVEYFLSGKY-- 73

  Fly   777 EVNAANKLGTKGQLAMRYAELLKEVWTATTRSVAPLKLRFCVNKYAPQFAGGGQHDSQELLEWLL 841
             :.|..|  ...::...:|.|:.::|...:..|:|......|....|.|....|.|:||.|.::|
  Rat    74 -ITALQK--DCSEVTTAFAYLMTDMWLGDSDCVSPEIFLSAVGSLYPAFLKKTQQDAQEFLIYVL 135

  Fly   842 DALHEDLNRVMEKPYSELKDSNGRPDKIVAAEAWSQHHARNQSIIIDLFYGQLKSKVSCLGCGHE 906
            :.|||.|.:......||.:.:.....|:.|.|.         |||..||.|||...::||.|...
  Rat   136 NELHEALKKHCRGRASEKRTAQNCCRKVPAHET---------SIITRLFEGQLSYSITCLKCETC 191

  Fly   907 SVRFDPFSLLSLPLPVEN--------YIYFEVLVILLDGSVPIKYGFRLNSDCKYSHLKHK--LS 961
            :.:.:.|::||||:|.|.        ..:|:...:..:..:          .|.:..:|.:  :.
  Rat   192 TYKNEVFTILSLPIPSEYECSLQDCLQCFFQQDTLTWNNQI----------HCSFCEIKQETAVR 246

  Fly   962 TMCSLPPNLMLVCELWNSQIRQVLNDDEKLRT 993
            |..|..|.: :|..|....|:..:.  :||||
  Rat   247 TTISKAPKI-IVLHLKRFDIQGAVK--KKLRT 275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp32NP_001262074.2 EFh_PI-PLC 198..>251 CDD:333715
EF-hand motif 198..222 CDD:320029
EF-hand_7 227..290 CDD:463900
UBP12 486..>1002 CDD:227847 82/292 (28%)
Peptidase_C19 <1480..1737 CDD:470612
Usp50NP_001417364.1 None
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.