DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp32 and ubp8

DIOPT Version :9

Sequence 1:NP_001262074.2 Gene:Usp32 / 40169 FlyBaseID:FBgn0036913 Length:1779 Species:Drosophila melanogaster
Sequence 2:NP_592992.1 Gene:ubp8 / 2542135 PomBaseID:SPAC13A11.04c Length:449 Species:Schizosaccharomyces pombe


Alignment Length:515 Identity:103/515 - (20%)
Similarity:153/515 - (29%) Gaps:261/515 - (50%)


- Green bases have known domain annotations that are detailed below.


  Fly  1347 HAADCDDSLGYDFPFTLRAVKADGLTCAICPWSSFCRGCEIRCNNDYVLQGALPPI-----NAAA 1406
            ||.:....:|.|       || :|.|        :|.||:     |||.|..|..:     |..|
pombe    68 HAMEHTHMIGVD-------VK-NGHT--------YCFGCQ-----DYVYQTELETLRFKIKNIKA 111

  Fly  1407 SNTSTPKMNAKFPSLPNLEA-KRTPEYTA---------------------SLSYTPTTK--YFED 1447
            ..:...::..|:..:..||| ::.|...|                     |:.:.|..:  :|..
pombe   112 WQSDHKRLPEKYNQMVCLEAYRKYPPVCATAGLRGIQNLGATCFMSVILQSILHNPLVRNLFFSG 176

  Fly  1448 F------------TIAID---------------WDPTALHLRYQSTLERLWV------------D 1473
            |            |.|||               :.|||:       |..:|.            .
pombe   177 FHTSTDCKRPTCMTCAIDDMFSSIYNSKNKSTFYGPTAV-------LNLMWKLSKSLCGYSQQDG 234

  Fly  1474 HE---------------------TIAISR------------------REQVEP-----VDLNH-- 1492
            ||                     |..|.|                  |..|:|     :|:|.  
pombe   235 HEFFVYLLDQMHTESGGGTSMPCTCPIHRIFSGSLKNVVTCLDCKKERVAVDPLMDISLDINEPT 299

  Fly  1493 ---CLRAFTSEEKLEQWYHCSHCKGKKPATKKLQIWKLPPILIVHLKRFNCVN-GKWVKSQKVVH 1553
               ||..|.|:||::  |.|..| |.|.|.|:|...||||.:.:.||||...| ....|..|.|.
pombe   300 LQGCLERFVSKEKVQ--YSCHSC-GSKNAIKQLVFDKLPPTICMQLKRFEQNNFAMSTKIDKQVS 361

  Fly  1554 FPFDDFDPTPYLASVPQETILRHKELLELKNDAEMTMATNEVVSELDEIDAPSKEVKEELPNQTG 1618
            :|       .:|                                                     
pombe   362 YP-------AFL----------------------------------------------------- 366

  Fly  1619 STKATASPPPTGNILRQSKTKNAVRRQRLISTSLTKTPIVDGEFEDYHQHRLKPDVDQFDPRYRL 1683
                                                              |::.:.:|.|..|:|
pombe   367 --------------------------------------------------RMRYNFNQDDVDYQL 381

  Fly  1684 YAVVSHSGMLNGGHYISYASNATGSWYCYNDSSCREISQKPVIDPSAAYLLFYERKGLDY 1743
            |:||.|.|.|:.||||:| :.....|:..:|::..|:.:..|:: |.||||||..:.:.|
pombe   382 YSVVCHKGTLDTGHYIAY-TYYQNQWFLLDDTTIVEVKESEVLN-SQAYLLFYHERQILY 439

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp32NP_001262074.2 FRQ1 186..317 CDD:227455
UBP12 486..>1002 CDD:227847
Peptidase_C19 <1480..1737 CDD:351799 60/285 (21%)
ubp8NP_592992.1 ZnF_UBP 37..85 CDD:197632 7/24 (29%)
UCH 144..432 CDD:278850 76/409 (19%)
Peptidase_C19D 145..433 CDD:239125 77/409 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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