DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp32 and ubp1

DIOPT Version :9

Sequence 1:NP_001262074.2 Gene:Usp32 / 40169 FlyBaseID:FBgn0036913 Length:1779 Species:Drosophila melanogaster
Sequence 2:NP_587999.1 Gene:ubp1 / 2539228 PomBaseID:SPCC16A11.12c Length:849 Species:Schizosaccharomyces pombe


Alignment Length:1298 Identity:266/1298 - (20%)
Similarity:427/1298 - (32%) Gaps:566/1298 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly   491 PGPIDNSNLITANPFRNVRTLTGEGGHLKRDTPLVQNHDFELVPKSLWKALNRWYG-DNLPLPRQ 554
            ||||....|:            .|...||..  |.::.|:.:|..|||..|..|:| :.|.:.|:
pombe    68 PGPITQWRLL------------DEKNELKHS--LEESIDYSIVSASLWHMLVEWFGLEGLAIERK 118

  Fly   555 VI-------QPPNSDVELELYPLN--LRILLHQAQPSQTGVGGGTQLGSWGSTVSGGYGVLASGG 610
            |:       |.|..|:    ||:|  |.:|........|                          
pombe   119 VLLVGLAAEQKPFVDI----YPINFTLHVLFDPINGENT-------------------------- 153

  Fly   611 GYAAIAVSSVLQPPKRYLA---YTAAFSRLATVRQVGEFLCEQLRLK-SEDIRLWHVPQL----- 666
                 :.|.:.|..:.|.:   |..:|||..|:|.:.:.:.|..::. ....|||::.:.     
pombe   154 -----SYSPLYQIDEPYHSDEPYAFSFSRSDTLRSLYKQVMEAFQISDGTSFRLWYLNKSNLSSR 213

  Fly   667 --------DNGAI-LLEEDAMCLK--ELLIRDNDQLLLEIRNKDLTWPEELGSLATAQCGQGAGT 720
                    |..|| ||.|.|:|:.  |:.|.|. .||||.::.:..|..:               
pombe   214 FVSLSEFNDQPAIALLSEYAVCMTIFEIDIADG-SLLLEFQHPNGEWLSD--------------- 262

  Fly   721 PGDRRRLTRSSIMSVHAP-GATGLHNLGNTCFMNAALQVLFNTQPLAQYFQREMHRFEVNAANKL 784
                 .:|:...::::.. |..||:||||:|:||:|||.:.:|..|.:||..:.:..::|..|.|
pombe   263 -----SITKEQNLTINKEIGLCGLYNLGNSCYMNSALQCMIHTHELTKYFLSDSYEKDINYNNPL 322

  Fly   785 GTKGQLAMRYAELLKEV-WTATTRSVAPLKLRFCVNKYAPQFAGGGQHDSQELLEWLLDALHEDL 848
            |..|::|:.||.|||.: .||...||:|...:|.:.::...|:|..|.||||.:.:.||.|||||
pombe   323 GMMGKVALSYASLLKMIHHTADMHSVSPSSFKFIIGEFNTYFSGYRQQDSQEFIAFFLDGLHEDL 387

  Fly   849 NRVMEKPYSELKDSNGRPD---------KIVAAEAWSQHHARNQSIIIDLFYGQLKSKVSCLGCG 904
            ||:..|||.|      |||         :.||.:.|..|..||.|||:.||.|..||.:.|..|.
pombe   388 NRIQIKPYFE------RPDLFDEHPLHVQRVANQCWDIHTKRNDSIIVQLFQGMYKSTLECSICY 446

  Fly   905 HESVRFDPFSLLSLPLPVENYIYFEVLVILLDGSVPIKYGFRLNSDCKYSHLKHKLSTMCSLPPN 969
            .:|..||||..|:||||                           :..|:.|      .:..:|| 
pombe   447 QKSTAFDPFMYLTLPLP---------------------------TSAKWRH------KVVYVPP- 477

  Fly   970 LMLVCELWNSQIRQVLNDDEKLRTQSAKELYVYQLPEQSMRTRSNSGLSMHIEQGLKDIQRSSAL 1034
                                 ..|||..|||:..|.|.::       :.|..:            
pombe   478 ---------------------FGTQSPVELYLELLMESTV-------IQMKFQ------------ 502

  Fly  1035 ITSAQDSLSSLSTLQTSSHRASSRVLCNGHVSGLDVEGEAEVGTDVSQCNSNSNYNPIVSTYSGN 1099
               |.:.|..:.            :.| |.::..|:                         |.| 
pombe   503 ---ATEKLQKMG------------LEC-GELTACDI-------------------------YRG- 525

  Fly  1100 GSGDNQVHELLPDEAGKVSRCFGKRECMPHSLFCFKESLILSSSPENTFMHGAAAQQKRVSSAKL 1164
                 :|:::|.:: .|:|:...|.                    ::..::|:.|          
pombe   526 -----KVYKVLKNK-DKISKKIHKW--------------------DHVVLYGSTA---------- 554

  Fly  1165 LHTESNTSSMSYTNHSGENSMESSLTEPIPLADLEPVSSRNGSGGEDCSYRTSPNDSSGLSTGHT 1229
                                  :.||.||.               ..|.....|           
pombe   555 ----------------------NGLTIPIV---------------HGCKRPAMP----------- 571

  Fly  1230 LGASLDVDEQAEEGNAEDHDQPDQITTSQPETSSGVYSRRSSQPPHKAGKYLVAVHRKITRHDSY 1294
                         |:.:.:|                                             
pombe   572 -------------GSYQSND--------------------------------------------- 578

  Fly  1295 FLSYHKTRPSLFGVPL-LIPNSEGGTHKDLYCAVWLQVSRLLSPLPATTEQANHAADCDDSLGYD 1358
                      :||.|| |...|......||...: :::.|:.             |..|.::|  
pombe   579 ----------VFGFPLQLNVRSRNVLTNDLVKEI-VELYRVY-------------AGIDVAIG-- 617

  Fly  1359 FPFTLRAVKADGLTCAICPWSSFCRGCEIRCNNDYVLQGALPPINAAASNTSTPKMNAKFPSLPN 1423
                                               .||..|..:.:.|         .|:..:..
pombe   618 -----------------------------------TLQLGLKRMESKA---------GKWECIKE 638

  Fly  1424 LEAKRTPEYTASLSYTPTTKYFEDFTIAIDWDPTALHLRYQSTLERLWVDHETIAISRREQVEPV 1488
            :|.||             .:..|:..|.||.....:.|......|:|:.:.|.|....:..:|.:
pombe   639 IEVKR-------------FEIVEEEEIVIDDKTVIMCLWNDQQYEKLFYNCEWIFEKIQFHMESI 690

  Fly  1489 DLNHCLRAFTSEEKL---EQWYHCSHCKGKKPATKKLQIWKLPPILIVHLKRFNCVNGKWVKSQK 1550
            .|..||..|:..|:|   :.|| |..||..:||||:|:||:||.||::||.||:...|...:.:|
pombe   691 TLEDCLLEFSKPEQLDLQDSWY-CPGCKAFRPATKRLEIWRLPKILVIHLNRFSGHGGDLRRRRK 754

  Fly  1551 ---VVHFPFDDFDPTPYLASVPQETILRHKELLELKNDAEMTMATNEVVSELDEIDAPSKEVKEE 1612
               :|.:|..|.:...:|:..                                            
pombe   755 RRDLVVYPVFDLNLKQFLSPF-------------------------------------------- 775

  Fly  1613 LPNQTGSTKATASPPPTGNILRQSKTKNAVRRQRLISTSLTKTPIVDGEFEDYHQHRLKPDVDQF 1677
                                                        |.|.|:....:..|       
pombe   776 --------------------------------------------IKDHEWLSSQKSML------- 789

  Fly  1678 DPRYRLYAVVSHSGMLNGGHYISYASNATG-SWYCYNDSSCREISQKPVIDPSAAYLLFYERK 1739
               |.||||.:|.|.::.|||.:||.:|:. :::.::|::..||..:.:: .|:||:|||..|
pombe   790 ---YDLYAVDNHHGFMSNGHYTAYARDASSQTFFKFDDTAICEIDPEDIV-TSSAYVLFYRAK 848

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp32NP_001262074.2 FRQ1 186..317 CDD:227455
UBP12 486..>1002 CDD:227847 152/551 (28%)
Peptidase_C19 <1480..1737 CDD:351799 58/263 (22%)
ubp1NP_587999.1 UBP12 1..849 CDD:227847 266/1298 (20%)
DUSP 45..123 CDD:197831 20/68 (29%)
Peptidase_C19 280..>472 CDD:271592 84/230 (37%)
Peptidase_C19 280..>394 CDD:271592 49/113 (43%)
Peptidase_C19R <690..846 CDD:239139 57/255 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 279 1.000 Domainoid score I302
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 297 1.000 Inparanoid score I612
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm47263
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR21646
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.060

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