DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Usp32 and ubp12

DIOPT Version :9

Sequence 1:NP_001262074.2 Gene:Usp32 / 40169 FlyBaseID:FBgn0036913 Length:1779 Species:Drosophila melanogaster
Sequence 2:NP_588530.1 Gene:ubp12 / 2538990 PomBaseID:SPCC1494.05c Length:979 Species:Schizosaccharomyces pombe


Alignment Length:1317 Identity:312/1317 - (23%)
Similarity:453/1317 - (34%) Gaps:499/1317 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   487 GPVRPGPIDNSNLITANPFRNVRTLTGEGGHLKRDTPLVQNHDFELVPKSLWKALNRWYGDNLP- 550
            ||. |||:|..::...           |.|.||.|  |.:..||.::.:.:|..|.||||...| 
pombe    96 GPF-PGPVDQEDIADL-----------ETGTLKPD--LQEEIDFTIISRDVWDLLVRWYGLKGPE 146

  Fly   551 LPRQVI---QPPNSDVELELYP--LNLRILLHQAQPSQTGVGGGTQLGSWGSTVSGGYGVLASGG 610
            .||:.:   ...:..:.:|:||  .:|.:|                     ||            
pombe   147 FPRETVNLGSESHPHLVVEVYPPIFSLTLL---------------------ST------------ 178

  Fly   611 GYAAIAVSSVLQPPKRYLAYTAAFSRLATVRQVGEFLCEQLRLKSEDIRLWHVPQLDNGAILLEE 675
              .|:..:...:|.|      .:.|..:|:..:.|.:...|.|.|:..|||.|          :.
pombe   179 --NAVDANESHKPKK------ISLSSKSTLEDLLEGVKYTLSLPSDQFRLWRV----------DT 225

  Fly   676 DAMCLKEL----LIRDNDQLLLEIRNKDLTWPEELG-----SLATAQCGQGAGTPGDR------- 724
            |....:.:    .|:.|.:.:::...|..|. .|||     || .|:|......|.||       
pombe   226 DQPLHRTIDPSSFIKINSKEIIDFLEKSKTL-VELGMDSSCSL-VAECMINETWPVDRALRLQFL 288

  Fly   725 --RRLTRSS----IMSVHAPGATGLHNLGNTCFMNAALQVLFNTQPLAQYFQREMHRFEVNAANK 783
              :|..:||    ......||..||.||||||:||:|||.|.:|:.|..:|..:..:.:||.:|.
pombe   289 IQQRNNQSSNEEQKQEKRVPGTCGLSNLGNTCYMNSALQCLTHTRELRDFFTSDEWKNQVNESNP 353

  Fly   784 LGTKGQLAMRYAELLKEVWTATTRSVAPLKLRFCVNKYAPQFAGGGQHDSQELLEWLLDALHEDL 848
            ||..||:|..:|.|:|.:::....|.||.:.:..:.|:...|.|.||.||||.|.:|||.|||||
pombe   354 LGMGGQVASIFASLIKSLYSPEHSSFAPRQFKATIGKFNHSFLGYGQQDSQEFLAFLLDGLHEDL 418

  Fly   849 NRVMEKPYSELKDSNGRPD---------KIVAAEAWSQHHARNQSIIIDLFYGQLKSKVSCLGCG 904
            ||:.:|||:      .:||         |..|.|.|..|..||.|:|:|||.|..:|.:.|..|.
pombe   419 NRIYQKPYT------SKPDLYEVDEEKIKNTAEECWRLHKLRNDSLIVDLFQGMYRSTLVCPVCN 477

  Fly   905 HESVRFDPFSLLSLPLPVENYIYFEVLVILLDGSV-PIKYGFRLNSDC-------KYSHLKHKLS 961
            ..|:.||||..|:|||||:......|..|..|.:: |:.....|.|..       ||...|...|
pombe   478 TVSITFDPFMDLTLPLPVKQVWSHTVTFIPADTNLTPLAIEVVLESKAATIEDLVKYVAEKSGCS 542

  Fly   962 TMCSLPPNLMLVCELWNSQIRQVLNDDEK---LRTQSAKELYVYQLPEQSMRTRSNSGLSMHIEQ 1023
            ..     ..:||.|.:..:..:.|....|   :......|:|:|:|...             .|.
pombe   543 DY-----RKILVTETYKGRFYRFLTQLSKSLLMEISEEDEIYLYELERP-------------YED 589

  Fly  1024 GLKDIQRSSALIT---SAQDSLSSLSTLQTSSHRASSRVLCNGHVSGLDVEGEAEVGTDVSQCNS 1085
            |..||     |:.   .:.||.:|                .|.::|..|..              
pombe   590 GSDDI-----LVPVYHISDDSTNS----------------ANSYMSSRDFG-------------- 619

  Fly  1086 NSNYNPIVSTYSGNGSGDNQVHELLPDEAGKVSRCFGKRECMPHSLFCFKESLILSSSPENTFMH 1150
                :|.|...|     ||:|     .:|..:|                 |.|            
pombe   620 ----HPFVLQLS-----DNEV-----TDASFIS-----------------EKL------------ 641

  Fly  1151 GAAAQQKRVSSAKLLHTESNTSSMSYTNHSGENSMESSLTEPIPLADLEPVSSRNGSGGEDCSYR 1215
                        ||.:.:..|    ..|....:|:||                            
pombe   642 ------------KLKYQQFTT----LKNLKNIDSLES---------------------------- 662

  Fly  1216 TSPNDSSGLSTGHTLGASLDVDEQAEEGNAE---DHDQPDQITTSQPETSSGVYSRRSSQPPHKA 1277
                    |..||.       |||.::|..:   ||.|       .|.....|:..|..:.|  .
pombe   663 --------LELGHE-------DEQVQKGPLDVDMDHSQ-------TPLFEMRVFHDRFEKIP--T 703

  Fly  1278 GKYLVAVHRKITRHDSYFLSYHKTRPSLFGVPLLIPNSEGGTHKDLYCAVWLQVSRLLSPLPATT 1342
            |..:                      |:..:|||....:    |||...|        .||.|  
pombe   704 GWNM----------------------SVSNLPLLTERDK----KDLESTV--------DPLDA-- 732

  Fly  1343 EQANHAADCDDSLGYDFPFTLRAVKADGLTCAICPWSSFCRGCEIRCNNDYVLQGALPPINAAAS 1407
                |:.:.:|.                        |.|         .| |..|:.|..:.:..
pombe   733 ----HSIEEEDD------------------------SEF---------KD-VAPGSYPEPSKSNE 759

  Fly  1408 NTS-TPKMNAKFPSLPNLEAKRTPE--YTASLSYTPTTKYFEDFTIAIDWDPTALHLRYQSTLER 1469
            ||. |.|.|.:.....:|.....||  |....|..|::....                     ..
pombe   760 NTKLTAKENDRLLIQGDLLVCEWPEKSYQFVFSVAPSSPQMG---------------------RS 803

  Fly  1470 LWVDHETIAISRREQVE---PVDLNHCLRAFTSEEKL---EQWYHCSHCKGKKPATKKLQIWKLP 1528
            ||::.:||...:::..|   .:.||.||..|...|:|   :.|| |..||..:.|:|:::||:.|
pombe   804 LWLESKTILSDKKDDSEDSRTITLNDCLDEFEKTEQLGEEDPWY-CPTCKEFRQASKQMEIWRCP 867

  Fly  1529 PILIVHLKRFNCVNGKWVKSQKVVHFPFDDFDPTPYLASVPQETILRHKELLELKNDAEMTMATN 1593
            .|||.|||||:.......|...:|.||.|:.|                           |:|   
pombe   868 EILIFHLKRFSSERRFRDKIDDLVEFPIDNLD---------------------------MSM--- 902

  Fly  1594 EVVSELDEIDAPSKEVKEELPNQTGSTKATASPPPTGNILRQSKTKNAVRRQRLISTSLTKTPIV 1658
                                  :|||.|.:....|                 :||          
pombe   903 ----------------------RTGSYKLSEKENP-----------------KLI---------- 918

  Fly  1659 DGEFEDYHQHRLKPDVDQFDPRYRLYAVVSHSGMLNGGHYISYASNA-TGSWYCYNDSSCREISQ 1722
                                  |.||||.:|.|.|.||||.::|.|. .|.:||::||....:..
pombe   919 ----------------------YELYAVDNHYGGLGGGHYTAFAKNPDNGQFYCFDDSRVTPVCP 961

  Fly  1723 KPVIDPSAAYLLFYERK 1739
            :..: .||||||||.||
pombe   962 EETV-TSAAYLLFYRRK 977

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp32NP_001262074.2 FRQ1 186..317 CDD:227455
UBP12 486..>1002 CDD:227847 163/562 (29%)
Peptidase_C19 <1480..1737 CDD:351799 67/263 (25%)
ubp12NP_588530.1 UBP12 33..978 CDD:227847 312/1317 (24%)
DUSP 69..155 CDD:197831 23/72 (32%)
Peptidase_C19 312..>513 CDD:271592 86/206 (42%)
USP7_C2 519..>648 CDD:291217 38/236 (16%)
Peptidase_C19R <825..975 CDD:239139 66/252 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 279 1.000 Domainoid score I302
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 297 1.000 Inparanoid score I612
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm47263
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR21646
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.060

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