DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp32 and usp-50

DIOPT Version :10

Sequence 1:NP_001262074.2 Gene:Usp32 / 40169 FlyBaseID:FBgn0036913 Length:1779 Species:Drosophila melanogaster
Sequence 2:NP_507513.2 Gene:usp-50 / 180175 WormBaseID:WBGene00008441 Length:811 Species:Caenorhabditis elegans


Alignment Length:420 Identity:111/420 - (26%)
Similarity:177/420 - (42%) Gaps:88/420 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   692 LLEIRNKDLTWPEE-LGSLATAQCGQG----------AGTPGDRRRLTRS-------SI-----M 733
            ||:..:|..|.||. :....|.|.|.|          |..|..:...|..       ||     |
 Worm   393 LLDRTSKPSTLPERPIDPSPTRQNGGGEVKRPPLLDRATKPNAQNAQTSKQHEAQLLSIYDQMDM 457

  Fly   734 SVH-------------APGATGLHNLGNTCFMNAALQVLFNTQPLAQYFQREMHRFEVNAANKLG 785
            ::|             .|||.||.|:||||||:|.||.||.|..||:.|.:::...:||..::||
 Worm   458 AIHRVVDDSTRNKGRGVPGAVGLFNMGNTCFMSATLQCLFQTPGLAEVFTKKVFVSKVNTQSRLG 522

  Fly   786 TKGQLAMRYAELLKEVWTATTRSVAP---LKLRFCVNKYAPQFAGGGQHDSQELLEWLLDALHED 847
            :||.::..:|.|...:|..|..::.|   |:| |....|.| .:.|.|||:.|...:||||||||
 Worm   523 SKGVISAGFASLSDMIWNGTFTAIRPSRFLQL-FSDTVYQP-LSDGRQHDASEFQIFLLDALHED 585

  Fly   848 LNRVMEKPYSELKDSNGRPDKIVAAEAWSQHHARNQSIIIDLFYGQLKSKVSCLGCGHESVRFDP 912
            .|:.....: |.....|......||:...:|:..:.|.:..|......|::.||.||..|..|:.
 Worm   586 TNQAQRISF-EQNYHGGAGIAKEAADFLKKHYQFSLSPVNRLLGSITVSEIRCLTCGASSATFEE 649

  Fly   913 FSLLSLPLPVENYIYFEVLV------ILLDGSVPIKYGFRLN-SDCKYSHLKHKLSTMCSLPPNL 970
            .:::|:.:|..:....::.:      ..|||.      .|.| ..||......:.|.:...||.:
 Worm   650 NTIISVEIPSNSSCSLDMCLRSHFSQTKLDGD------SRWNCPKCKEPRASTRTSKLWQPPPVM 708

  Fly   971 MLVCE---LWNSQIRQVLNDDEK-----------------LRTQSAKELYVYQLPEQSMRT-RSN 1014
            ::..:   |:|       .|.||                 |...:..|..||:|...::.. |.|
 Worm   709 IIHLKRFALFN-------GDFEKNTAAVTFETARFDVRPYLHEMAPAEKPVYKLYAATLHNGRLN 766

  Fly  1015 SG----LSMHIEQGLKDIQRSSALITSAQD 1040
            ||    ::.|:... |.::...:::|..::
 Worm   767 SGHYTAVASHLRSD-KWLRFDDSVVTPCEN 795

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp32NP_001262074.2 EFh_PI-PLC 198..>251 CDD:333715
EF-hand motif 198..222 CDD:320029
EF-hand_7 227..290 CDD:463900
UBP12 486..>1002 CDD:227847 101/375 (27%)
Peptidase_C19 <1480..1737 CDD:470612
usp-50NP_507513.2 USP8_dimer <28..115 CDD:462647
UCH 478..808 CDD:425685 91/335 (27%)
Blue background indicates that the domain is not in the aligned region.

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