DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp32 and usp-50

DIOPT Version :9

Sequence 1:NP_001262074.2 Gene:Usp32 / 40169 FlyBaseID:FBgn0036913 Length:1779 Species:Drosophila melanogaster
Sequence 2:NP_507513.2 Gene:usp-50 / 180175 WormBaseID:WBGene00008441 Length:811 Species:Caenorhabditis elegans


Alignment Length:420 Identity:111/420 - (26%)
Similarity:177/420 - (42%) Gaps:88/420 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   692 LLEIRNKDLTWPEE-LGSLATAQCGQG----------AGTPGDRRRLTRS-------SI-----M 733
            ||:..:|..|.||. :....|.|.|.|          |..|..:...|..       ||     |
 Worm   393 LLDRTSKPSTLPERPIDPSPTRQNGGGEVKRPPLLDRATKPNAQNAQTSKQHEAQLLSIYDQMDM 457

  Fly   734 SVH-------------APGATGLHNLGNTCFMNAALQVLFNTQPLAQYFQREMHRFEVNAANKLG 785
            ::|             .|||.||.|:||||||:|.||.||.|..||:.|.:::...:||..::||
 Worm   458 AIHRVVDDSTRNKGRGVPGAVGLFNMGNTCFMSATLQCLFQTPGLAEVFTKKVFVSKVNTQSRLG 522

  Fly   786 TKGQLAMRYAELLKEVWTATTRSVAP---LKLRFCVNKYAPQFAGGGQHDSQELLEWLLDALHED 847
            :||.::..:|.|...:|..|..::.|   |:| |....|.| .:.|.|||:.|...:||||||||
 Worm   523 SKGVISAGFASLSDMIWNGTFTAIRPSRFLQL-FSDTVYQP-LSDGRQHDASEFQIFLLDALHED 585

  Fly   848 LNRVMEKPYSELKDSNGRPDKIVAAEAWSQHHARNQSIIIDLFYGQLKSKVSCLGCGHESVRFDP 912
            .|:.....: |.....|......||:...:|:..:.|.:..|......|::.||.||..|..|:.
 Worm   586 TNQAQRISF-EQNYHGGAGIAKEAADFLKKHYQFSLSPVNRLLGSITVSEIRCLTCGASSATFEE 649

  Fly   913 FSLLSLPLPVENYIYFEVLV------ILLDGSVPIKYGFRLN-SDCKYSHLKHKLSTMCSLPPNL 970
            .:::|:.:|..:....::.:      ..|||.      .|.| ..||......:.|.:...||.:
 Worm   650 NTIISVEIPSNSSCSLDMCLRSHFSQTKLDGD------SRWNCPKCKEPRASTRTSKLWQPPPVM 708

  Fly   971 MLVCE---LWNSQIRQVLNDDEK-----------------LRTQSAKELYVYQLPEQSMRT-RSN 1014
            ::..:   |:|       .|.||                 |...:..|..||:|...::.. |.|
 Worm   709 IIHLKRFALFN-------GDFEKNTAAVTFETARFDVRPYLHEMAPAEKPVYKLYAATLHNGRLN 766

  Fly  1015 SG----LSMHIEQGLKDIQRSSALITSAQD 1040
            ||    ::.|:... |.::...:::|..::
 Worm   767 SGHYTAVASHLRSD-KWLRFDDSVVTPCEN 795

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp32NP_001262074.2 FRQ1 186..317 CDD:227455
UBP12 486..>1002 CDD:227847 101/375 (27%)
Peptidase_C19 <1480..1737 CDD:351799
usp-50NP_507513.2 USP8_dimer 8..114 CDD:370218
UCH 478..808 CDD:366104 91/335 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1283205at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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