DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp32 and usp48

DIOPT Version :10

Sequence 1:NP_001262074.2 Gene:Usp32 / 40169 FlyBaseID:FBgn0036913 Length:1779 Species:Drosophila melanogaster
Sequence 2:NP_001120167.1 Gene:usp48 / 100145207 XenbaseID:XB-GENE-5938602 Length:1039 Species:Xenopus tropicalis


Alignment Length:283 Identity:57/283 - (20%)
Similarity:87/283 - (30%) Gaps:138/283 - (48%)


- Green bases have known domain annotations that are detailed below.


  Fly  1490 LNHCLRAFTSEEKLE--QWYHCSHCKGKKPATKKLQIWKLPPILIVHLKRFNCVNGKWVKSQKVV 1552
            |..|:..|..|||||  ..|.|.:|:.|:.||:|:::..|||.|.:.|.|               
 Frog   249 LTECIAEFLKEEKLEGDNRYFCENCQSKQNATRKIRLLDLPPTLNLQLMR--------------- 298

  Fly  1553 HFPFDDFDPTPYLASVPQETILRHKELLELKNDAEMTMATNEVVSELDEIDAPSKEVKEELPNQT 1617
             |.||                                                         .||
 Frog   299 -FVFD---------------------------------------------------------RQT 305

  Fly  1618 GSTKATASPPPTGNILRQSKTKNAVRRQRLISTSLTKTPIVDGEFEDYHQHRLKPDVDQFDP--R 1680
            |..|.                         ::|.:..:..:|          :.|.:||.|.  .
 Frog   306 GHKKK-------------------------LNTYIGFSETLD----------MDPYLDQTDGTYS 335

  Fly  1681 YRLYAVVSHSGM-LNGGHYISYASN-ATGSWYCYNDSSCREISQKPV-------IDPSA------ 1730
            |.|.||:.|.|: ...||||::..: .||.||.:||....::..|.:       ::.|.      
 Frog   336 YELSAVLIHRGVSAYSGHYIAHVKDPQTGEWYKFNDEDIEKMEGKKLQLGIEEDLEQSKTAPRKP 400

  Fly  1731 -----------AYLLFYERKGLD 1742
                       ||:|.|..|.::
 Frog   401 KCGKGIHCSRNAYMLVYRLKTVE 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp32NP_001262074.2 EFh_PI-PLC 198..>251 CDD:333715
EF-hand motif 198..222 CDD:320029
EF-hand_7 227..290 CDD:463900
UBP12 486..>1002 CDD:227847
Peptidase_C19 <1480..1737 CDD:470612 55/276 (20%)
usp48NP_001120167.1 Peptidase_C19L 90..418 CDD:239133 55/276 (20%)
DUSP 483..554 CDD:399383
Ubl_USP48 943..1038 CDD:340493
Blue background indicates that the domain is not in the aligned region.

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