DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab8 and RAB11A

DIOPT Version :10

Sequence 1:NP_524172.1 Gene:Rab8 / 40168 FlyBaseID:FBgn0262518 Length:207 Species:Drosophila melanogaster
Sequence 2:NP_004654.1 Gene:RAB11A / 8766 HGNCID:9760 Length:216 Species:Homo sapiens


Alignment Length:195 Identity:89/195 - (45%)
Similarity:131/195 - (67%) Gaps:16/195 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 YDYLFKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNKKIKLQIWDTAGQER 69
            ||||||::|||||||||:.:|.||:.:.||....||||::|..|:|::|.|.||.||||||||||
Human     8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQER 72

  Fly    70 FRTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENASADVEKMLLGNKCELTDKRQVSKE 134
            :|.||:||||||:|.:|||||.:..::||::.|::.:.::|.:::..||:|||.:|...|.|..:
Human    73 YRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTD 137

  Fly   135 RGEQLAIEYGIKFMETSAKASINVEEAFLTLASDI-KAKTEKRME---------ANN------PP 183
            .....|.:.|:.|:||||..|.|||.||.|:.::| :..::|:|.         :||      ||
Human   138 EARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDRRENDMSPSNNVVPIHVPP 202

  Fly   184  183
            Human   203  202

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab8NP_524172.1 Rab8_Rab10_Rab13_like 6..172 CDD:206659 82/166 (49%)
RAB11ANP_004654.1 Rab11_like 9..173 CDD:206660 81/163 (50%)

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