DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab8 and YPT31

DIOPT Version :10

Sequence 1:NP_524172.1 Gene:Rab8 / 40168 FlyBaseID:FBgn0262518 Length:207 Species:Drosophila melanogaster
Sequence 2:NP_010948.1 Gene:YPT31 / 856753 SGDID:S000000833 Length:223 Species:Saccharomyces cerevisiae


Alignment Length:190 Identity:91/190 - (47%)
Similarity:123/190 - (64%) Gaps:11/190 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 YDYLFKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNKKIKLQIWDTAGQER 69
            ||.|||::|||||||||:.:|.||:::.||....||||::|..||:|:|.|:||.||||||||||
Yeast    10 YDLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIDGKRIKAQIWDTAGQER 74

  Fly    70 FRTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENASADVEKMLLGNKCELTDKRQVSKE 134
            :|.||:||||||:|.::||||::..|:||..:|:..:.|||..:|...|:|||.:|...|.|..|
Yeast    75 YRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELRENADDNVAVGLIGNKSDLAHLRAVPTE 139

  Fly   135 RGEQLAIEYGIKFMETSAKASINVEEAFLTLASDIKAKTEKRMEANNPPKGGHQLKPMDS 194
            ..:..|.|..:.|.||||..|.||::||..|.:.|..|..|           ||:...||
Yeast   140 ESKTFAQENQLLFTETSALNSENVDKAFEELINTIYQKVSK-----------HQMDLGDS 188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab8NP_524172.1 Rab8_Rab10_Rab13_like 6..172 CDD:206659 84/165 (51%)
YPT31NP_010948.1 Rab11_like 11..175 CDD:206660 83/163 (51%)

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